Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
STOmics
/
Stereopy
Public
Notifications
You must be signed in to change notification settings
Fork
73
Star
290
Code
Issues
29
Pull requests
6
Discussions
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Discussions
Actions
Projects
Security and quality
Insights
Actions: STOmics/Stereopy
Actions
All workflows
Workflows
Auto Create PR
Auto Create PR
Auto Fix Issue (mini-swe-agent)
Auto Fix Issue (mini-swe-agent)
Auto-fix Guard Rails
Auto-fix Guard Rails
CPU PyTest Demo in Conda Tanliwei Branch
CPU PyTest Demo in Conda Tanliwei Branch
CPU PyTest in Conda Dev Branch
CPU PyTest in Conda Dev Branch
CPU PyTest in Conda Dev/Work Branch Image
CPU PyTest in Conda Dev/Work Branch Image
CPU PyTest in Conda Work Branch
CPU PyTest in Conda Work Branch
CPU Windows PyTest in Conda
CPU Windows PyTest in Conda
GPU PyTest in Conda Work
GPU PyTest in Conda Work
Manual CPU PyTest in Conda
Manual CPU PyTest in Conda
Show more workflows...
Management
Caches
All workflows
All workflows
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Showing runs from all workflows
will be ignored since log searching is not yet available
137 workflow runs
137 workflow runs
Workflow
Filter by Workflow
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching workflows.
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
fix #454: guard against None in PlotCollection.__getattr__ to prevent TypeError
Auto-fix Guard Rails
#29:
Pull request
#456
opened by
cursor
Bot
9s
cursorstereopy-issue-automation-1234
cursorstereopy-issue-automation-1234
9s
View #456
View workflow file
fix #454: guard against None in PlotCollection.__getattr__ to prevent TypeError
Trigger Cursor PR Review
#8:
Pull request
#456
opened by
cursor
Bot
6s
cursorstereopy-issue-automation-1234
cursorstereopy-issue-automation-1234
6s
View #456
View workflow file
fix #453: use np.array() instead of np.asarray() for PIL image conversion
Trigger Cursor PR Review
#7:
Pull request
#455
opened by
cursor
Bot
8s
cursorstereopy-issue-automation-4875
cursorstereopy-issue-automation-4875
8s
View #455
View workflow file
fix #453: use np.array() instead of np.asarray() for PIL image conversion
Auto-fix Guard Rails
#28:
Pull request
#455
opened by
cursor
Bot
1s
cursorstereopy-issue-automation-4875
cursorstereopy-issue-automation-4875
1s
View #455
View workflow file
TypeError: 'NoneType' object is not callable
Trigger Cursor Automation
#43:
Issue
#454
labeled by
wanruiwen-genomics-cn
10s
10s
View workflow file
TypeError: 'NoneType' object is not callable
Auto Fix Issue (mini-swe-agent)
#58:
Issue
#454
labeled by
wanruiwen-genomics-cn
1s
1s
View workflow file
TypeError: 'NoneType' object is not callable
Auto Fix Issue (mini-swe-agent)
#57:
Issue
#454
labeled by
wanruiwen-genomics-cn
Skipped
Skipped
View workflow file
TypeError: 'NoneType' object is not callable
Trigger Cursor Automation
#42:
Issue
#454
labeled by
wanruiwen-genomics-cn
7s
7s
View workflow file
stereo.io.stereo_to_anndata After adding the HE staining image
Auto Fix Issue (mini-swe-agent)
#56:
Issue
#453
labeled by
wanruiwen-genomics-cn
8s
8s
View workflow file
stereo.io.stereo_to_anndata After adding the HE staining image
Trigger Cursor Automation
#41:
Issue
#453
labeled by
wanruiwen-genomics-cn
9s
9s
View workflow file
Does stereopy perform differential analysis on two selected cell populations or tissue regions?
Auto Fix Issue (mini-swe-agent)
#55:
Issue
#452
labeled by
wanruiwen-genomics-cn
1s
1s
View workflow file
Does stereopy perform differential analysis on two selected cell populations or tissue regions?
Trigger Cursor Automation
#40:
Issue
#452
labeled by
wanruiwen-genomics-cn
12s
12s
View workflow file
Download the reference data for SingleR for stereopy
Trigger Cursor Automation
#39:
Issue
#451
labeled by
wanruiwen-genomics-cn
10s
10s
View workflow file
Download the reference data for SingleR for stereopy
Auto Fix Issue (mini-swe-agent)
#54:
Issue
#451
labeled by
wanruiwen-genomics-cn
1s
1s
View workflow file
How to display the expression levels of a specific gene in a spatial clustering plot?
Auto Fix Issue (mini-swe-agent)
#53:
Issue
#450
labeled by
wanruiwen-genomics-cn
2s
2s
View workflow file
How to display the expression levels of a specific gene in a spatial clustering plot?
Trigger Cursor Automation
#38:
Issue
#450
labeled by
wanruiwen-genomics-cn
13s
13s
View workflow file
Perform SingleR in batch effect workflow
Auto Fix Issue (mini-swe-agent)
#52:
Issue
#448
labeled by
wanruiwen-genomics-cn
1s
1s
View workflow file
Perform SingleR in batch effect workflow
Trigger Cursor Automation
#37:
Issue
#448
labeled by
wanruiwen-genomics-cn
10s
10s
View workflow file
fix #382: handle 'layers' as h5py.Dataset in read_stereo_h5ad
Trigger Cursor PR Review
#6:
Pull request
#447
opened by
cursor
Bot
10s
cursorstereopy-issue-automation-e772
cursorstereopy-issue-automation-e772
10s
View #447
View workflow file
fix #382: handle 'layers' as h5py.Dataset in read_stereo_h5ad
Auto-fix Guard Rails
#27:
Pull request
#447
opened by
cursor
Bot
2s
cursorstereopy-issue-automation-e772
cursorstereopy-issue-automation-e772
2s
View #447
View workflow file
Segmentation fault(core dumped) on tissue_extraction_to_bgef
Trigger Cursor Automation
#36:
Issue
#224
labeled by
wanruiwen-genomics-cn
13s
13s
View workflow file
Segmentation fault(core dumped) on tissue_extraction_to_bgef
Auto Fix Issue (mini-swe-agent)
#51:
Issue
#224
labeled by
wanruiwen-genomics-cn
1s
1s
View workflow file
Preserve sparse cells for downstream analysis
Auto Fix Issue (mini-swe-agent)
#50:
Issue
#445
labeled by
wanruiwen-genomics-cn
Skipped
Skipped
View workflow file
Preserve sparse cells for downstream analysis
Trigger Cursor Automation
#35:
Issue
#445
labeled by
wanruiwen-genomics-cn
9s
9s
View workflow file
why the code for import image into seurat object is disabled by default in the latest h5ad2rds.R?
Auto Fix Issue (mini-swe-agent)
#49:
Issue
#244
labeled by
wanruiwen-genomics-cn
2s
2s
View workflow file
Previous
1
2
3
4
5
6
Next
You can’t perform that action at this time.