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Achievement: QuickdrawAchievement: Pull Shark

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@OpenMSKImaging

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wallematthias/README.md

Matthias Walle

Engineering focused on practical tools, imaging workflows, and reliable software delivery.

Profile

  • Current focus: medical imaging and Python tooling
  • Interests: reproducible pipelines, clean architecture, automation
  • Collaboration: open to project and research-oriented work

Stack

Technology stack

GitHub Metrics

GitHub streak

Repository Language Overview

Auto-updated from public repositories.

Language Share Repositories
Python 59.3% 10
Jupyter Notebook 35.6% 4
SCSS 1.8% 1
HTML 1.5% 2
JavaScript 0.6% 1
Ruby 0.3% 1
Shell 0.3% 4
C++ 0.2% 1

Notes

If it works on the first run, there is probably a hidden global state somewhere.

Contact

Pinned Loading

  1. BoneQuantMRI BoneQuantMRI Public

    MATLAB tool for analyzing MRI bone images using ROI-based segmentation and phantom calibration.

    MATLAB 1

  2. nnUNetManager nnUNetManager Public

    nnUNetManager is a command-line tool designed to manage and execute nnUNet models for medical image segmentation tasks.

    Python 2

  3. Bonelab/spineFE-benchmark Bonelab/spineFE-benchmark Public

    Code and instructions to reproduce the analyses from our study comparing linear and nonlinear finite element models of vertebral strength across the thoracic and lumbar spine using the VERSE19 data…

    Jupyter Notebook 1

  4. MotionScoreCNN MotionScoreCNN Public

    Code for Motion Grading of HR-pQCT scans

    Python 1