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treangenlab
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emu
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feature: add an emu docker file
Run tests
#45:
Pull request
#124
opened by
beatriz-figueredo
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beatriz-figueredo:docker_emu
beatriz-figueredo:docker_emu
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new database, march 2026
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#44:
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3a1a111
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MGNute
40s
master
master
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updated emu db
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#43:
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89aa774
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kdcurry
1m 24s
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master
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Merge pull request #115 from treangenlab/min-abun
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#42:
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8c3ea36
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kdcurry
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master
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min_threshold counts
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#41:
Pull request
#115
opened by
kdcurry
43s
min-abun
min-abun
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Merge pull request #110 from treangenlab/int-casting-error
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#40:
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cedafe3
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master
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cast only taxid to int
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#39:
Pull request
#110
opened by
kdcurry
1m 17s
int-casting-error
int-casting-error
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Merge pull request #106 from treangenlab/emu-pid
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#38:
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kdcurry
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master
master
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Add in percent identity and alignment length filters
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#37:
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#106
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emu-pid
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Add in percent identity and alignment length filters
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#36:
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Add in percent identity and alignment length filters
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#35:
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emu-pid
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Add in percent identity and alignment length filters
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#34:
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emu-pid
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Add in percent identity and alignment length filters
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#33:
Pull request
#106
opened by
microbemarsh
43s
emu-pid
emu-pid
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Update Python version requirement for Emu
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#32:
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642b73f
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Merge pull request #104 from treangenlab/kdcurry-patch-1
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#31:
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Add SILVA v138.2 database information to README
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#30:
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kdcurry-patch-1
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Add SILVA v138.2 database information to README
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#29:
Pull request
#104
opened by
kdcurry
1m 14s
kdcurry-patch-1
kdcurry-patch-1
1m 14s
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Update TRANA pipeline link in README.md
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#28:
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Merge pull request #102 from samuell/94-run-ci-on-master
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#27:
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master
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1m 14s
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Make sure CI is run on push to master too
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#26:
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#102
opened by
samuell
1m 18s
samuell:94-run-ci-on-master
samuell:94-run-ci-on-master
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Fix #94: Fix and clean up CI with supported Ubuntu version and more
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#25:
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#101
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samuell
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samuell:94-fix-ci
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Fix #94: Fix and clean up CI with supported Ubuntu version and more
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#24:
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#101
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samuell
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samuell:94-fix-ci
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Merge pull request #100 from treangenlab/custom-db-name-duplication
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#23:
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v3.5.5
v3.5.5
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Merge pull request #100 from treangenlab/custom-db-name-duplication
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#22:
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master
master
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add error for duplicate taxid in build custom db
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#21:
Pull request
#100
opened by
kdcurry
1d 0h 0m 1s
custom-db-name-duplication
custom-db-name-duplication
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