deps: re-vendor wfmash to v0.14.1 head - #236
Merged
Merged
Conversation
The vendored wfmash had drifted five commits behind v0.14.1 and was missing wfmash's AGC archive support.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
The wfmash copy vendored in wfmash-rs was still at
f1025695and had drifted five commits behind the v0.14.1 branch, missing wfmash's AGC archive support.pangenome/wfmash-rs b55cf75 syncs it to v0.14.1 head (
3fb8f6d), which also carries thestd::filesystemremoval from waveygang/wfmash#404.Alignment output is unchanged: yeast chrV gives 7 mapped reads and 4,518,438 aligned bp before and after. 572 tests pass.