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    45 repositories

    • Mentorship_Program

      Public
      4•0•0•1•Updated Jan 13, 2024Jan 13, 2024

    • Bioinformatics-Unit-Training

      Public
      Contains annual training schedules
      2•1•4•0•Updated Jan 13, 2024Jan 13, 2024

    • hpc-modules

      Public
      Module installation and usage notes for icipe hpc.
      Roff
      •5•1•0•0•Updated Jun 21, 2023Jun 21, 2023

    • GenomeAnnotationHackathon

      Public
      2•0•0•0•Updated Jun 21, 2023Jun 21, 2023

    • MachineLearning4Genomics

      Public
      Machine Learning for Genomics Course.
      pythondata-sciencemachine-learning
      pythondata-sciencemachine-learninggenomicsjupyter-notebooks
      Jupyter Notebook
      •
      Creative Commons Attribution 4.0 International
      •43•22•0•0•Updated Feb 15, 2023Feb 15, 2023

    • Reviewing-16s-Analysis-Workflows

      Public
      R
      •4•0•2•0•Updated Feb 14, 2023Feb 14, 2023

    • 16S_Accreditation

      Public
      Repo Containing the Scripts, results, and report from the Accreditation Exercise by icipe H3ABioNet node.
      HTML
      •10•4•2•0•Updated Feb 13, 2023Feb 13, 2023

    • hpc-environment-modules

      Public
      Roff
      •0•0•0•0•Updated Feb 7, 2023Feb 7, 2023

    • bioinformatics_incubation_data

      Public
      R
      •0•0•0•0•Updated Jan 31, 2023Jan 31, 2023

    • mbbu.github.io

      Public
      HTML
      •
      MIT License
      •2•0•0•0•Updated Jan 25, 2023Jan 25, 2023

    • Plasmodium_falciparum

      Public
      Reproducing methods from "Genomic analysis reveals independent evolution of Plasmodium falciparum populations in Ethiopia" Repo contains scripts, results, and …
      HTML
      •2•0•0•0•Updated Jan 16, 2023Jan 16, 2023

    • training-materials-and-resources

      Public
      Materials used to train students, interns and new staff
      1•0•6•0•Updated Jan 11, 2023Jan 11, 2023

    • Journal_Club

      Public
      Creative Commons Zero v1.0 Universal
      •34•0•0•0•Updated Dec 1, 2022Dec 1, 2022

    • ARPPIS_Bioinfo

      Public
      0•0•0•0•Updated Nov 11, 2022Nov 11, 2022

    • Compute-environment

      Public
      JavaScript
      •1•0•0•0•Updated Jul 20, 2022Jul 20, 2022

    • MyFirstFork

      Public
      Fork this repository and make changes to the README
      106•0•0•0•Updated Jul 12, 2022Jul 12, 2022

    • arbopan

      Public
      A pangenomics pipeline tailored for arboviruses.
      Nextflow
      •0•0•0•0•Updated Jun 28, 2022Jun 28, 2022

    • hpc_site

      Public
      A repo for hosting Bioinformatics Server at ICIPE
      0•0•1•0•Updated Jun 20, 2022Jun 20, 2022

    • Galaxy-training-workshop

      Public
      0•0•0•0•Updated Jun 16, 2022Jun 16, 2022

    • call_for_Bioinfo_Internship_Cohort6

      Public
      0•1•0•0•Updated Jun 6, 2022Jun 6, 2022

    • Seminar_Presentations

      Public
      9•0•0•3•Updated Jun 6, 2022Jun 6, 2022

    • Tutorials-software-guide

      Public
      Contains guide on how to run graphical software's, Pipelines and tutorials on sample use cases of analysis on the cluster.
      5•0•0•0•Updated Feb 3, 2022Feb 3, 2022

    • User_management_Hpc_cluster

      Public
      how to add a list of user to the cluster
      Shell
      •0•0•0•0•Updated Feb 3, 2022Feb 3, 2022

    • Icipe-hpc-environment

      Public
      This repo contains Environment Modules used in Icipe's research computing infrastructure.
      Roff
      •5•0•0•0•Updated Feb 3, 2022Feb 3, 2022

    • Onboarding

      Public
      This repository contains the onboarding resources and readings that are recommended for when you join the Bioinformatics team at MBBU
      5•1•1•0•Updated Feb 3, 2022Feb 3, 2022

    • call_for_Bioinfo_internship_cohort5

      Public
      The Bioinformatics internship program at icipe seeks to attract highly motivated graduates for a four-month internship and mentorship program.
      1•0•0•0•Updated Jan 8, 2022Jan 8, 2022

    • intbt_2019

      Public
      For sharing resource and tutorials from the int-bt H3ABioNet training
      R
      •9•1•4•0•Updated Nov 12, 2021Nov 12, 2021

    • ml-basics

      Public
      Exercise notebooks for Machine Learning modules on Microsoft Learn
      Jupyter Notebook
      •
      MIT License
      •2.3k•0•0•0•Updated Sep 14, 2021Sep 14, 2021

    • call_for_Bioinfo_internship_cohort4

      Public
      0•1•0•0•Updated Sep 3, 2021Sep 3, 2021

    • 16S-mini-project

      Public
      This is a workflow for 16S rRNA analysis.
      metadataqiime2usearch
      metadataqiime2usearchqiime2-environment
      Shell
      •
      MIT License
      •6•3•0•0•Updated Aug 30, 2021Aug 30, 2021
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