Repositories list

• dicom-deid-rs

  Public
  Rust

  •0•0•0•1•Updated Apr 3, 2026Apr 3, 2026

• n2y

  Public
  Notion to YAML (and Markdown)

  markdownyamlcms+ 4

  markdownyamlcmswordnotionnotion-apinotion-py

  Python

  •2•26•2•18•Updated Mar 1, 2026Mar 1, 2026

• django-utils-lib

  Public
  A bundle of useful utility functions and helpers for working with Django

  pythondjangopytest+ 1

  pythondjangopytestpytest-xdist

  Python

  •0•2•1•0•Updated Feb 26, 2026Feb 26, 2026

• fda-readable-sbom

  Public
  A python script that translates machine-readable SBOMs into a format suitable for FDA submissions.

  Python

  •0•6•2•1•Updated Nov 26, 2025Nov 26, 2025

• dicom-standard

  Public
  The DICOM standard, in JSON format, parsed from the HTML version using Python scripts

  parserjsondicom+ 1

  parserjsondicomstandard

  HTML

  •

  MIT License

  •20•130•45•2•Updated Jan 28, 2025Jan 28, 2025

• mdai-utils

  Public
  Utility functions for MD.ai. Download and upload 2D and 3D segmentation images.

  Python

  •

  Apache License 2.0

  •1•0•0•0•Updated Apr 20, 2024Apr 20, 2024

• python_project_template

  Public
  Python project template using copier. Includes linters, formatters, pre-commit hooks and github actions.

  Jinja

  •0•1•0•0•Updated Feb 3, 2024Feb 3, 2024

• natural-neighbor-interpolation

  Public
  Fast, discrete natural neighbor interpolation in 3D on the CPU.

  interpolationnumpyimage-processing+ 1

  interpolationnumpyimage-processingpython3

  C++

  •

  MIT License

  •21•94•6•2•Updated Nov 2, 2023Nov 2, 2023

• pacsman

  Public
  Picture Archiving and Communication System Manager And Numpifier

  Python

  •

  MIT License

  •4•19•11•1•Updated Jul 6, 2023Jul 6, 2023

• kaggle-HuBMAP

  Public
  HuBMAP - Hacking the Human Vasculature (Kaggle Competition)

  Jupyter Notebook

  •1•1•0•0•Updated Jul 5, 2023Jul 5, 2023

• dicom-numpy

  Public
  Properly generate a 3D numpy array from a set of DICOM files.

  numpydicom

  numpydicom

  Python

  •

  MIT License

  •13•96•4•0•Updated May 10, 2023May 10, 2023

• TotalSegmentator

  Public
  Tool for robust segmentation of 104 important anatomical structures in CT images

  Python

  •

  Apache License 2.0

  •422•0•0•0•Updated Dec 15, 2022Dec 15, 2022

• rdm

  Public
  Our regulatory documentation manager. Streamlines 62304, 14971, and 510(k) documentation for software projects.

  documentationmedicalregulations+ 3

  documentationmedicalregulationsiec-62304iso-14971iso-13485

  Python

  •

  MIT License

  •32•133•28•11•Updated Oct 27, 2022Oct 27, 2022

• .github

  Public
  0•0•0•0•Updated Aug 9, 2022Aug 9, 2022

• sed-docx

  Public
  Text substitution utility for docx files

  0•0•2•0•Updated Jun 28, 2022Jun 28, 2022

• rdm-example

  Public
  TeX

  •0•3•2•0•Updated Apr 7, 2022Apr 7, 2022

• cuda_memtest

  Public
  Fork of CUDA GPU memtest :eyeglasses:

  C++

  •35•0•0•0•Updated Nov 30, 2021Nov 30, 2021

• example-tm4c123-project

  Public
  A template for embedded Rust projects using the TM4C123 microcontroller

  Shell

  •0•0•0•0•Updated Oct 10, 2021Oct 10, 2021

• freesurfer

  Public
  The official FreeSurfer repository maintained by LCN

  C++

  •

  Other

  •284•1•8•0•Updated Aug 8, 2021Aug 8, 2021

• PyVCAM

  Public archive
  Python3.X wrapper for Photometrics and QImaging PVCAM based cameras

  Python

  •

  MIT License

  •20•0•0•0•Updated May 18, 2021May 18, 2021

• dicom-attribute-scraper

  Public
  Scripts for scraping and aggregating DICOM attributes

  pythonscraperdicom

  pythonscraperdicom

  Python

  •1•1•1•0•Updated Apr 7, 2021Apr 7, 2021

• et_xmlfile

  Public
  An implementation of lxml.xmlfile for the standard library

  Python

  •4•0•0•0•Updated Mar 25, 2021Mar 25, 2021

• matlab-style-guide

  Public
  0•0•0•0•Updated Oct 30, 2020Oct 30, 2020

• matlab-utils

  Public
  API-consistent functions that probably should be in the base MATLAB

  matlab

  matlab

  MATLAB

  •0•2•0•0•Updated Oct 28, 2020Oct 28, 2020

• juggling-vision-py

  Public archive
  Python

  •

  MIT License

  •3•0•0•0•Updated Jul 22, 2020Jul 22, 2020

• i18next-parser

  Public
  Code parser for i18next

  JavaScript

  •213•0•0•0•Updated Jun 29, 2020Jun 29, 2020

• hdat

  Public
  High dimensionality algorithm tester

  pythontestingsnapshot-testing+ 3

  pythontestingsnapshot-testingimage-processingtesting-toolsnumerical-methods

  Python

  •

  MIT License

  •1•6•5•0•Updated Jan 9, 2020Jan 9, 2020

• pre-trained-keras-example

  Public
  Example on how to use pre trained networks on new classification problems.

  machine-learningtensorflowexample+ 3

  machine-learningtensorflowexamplekeraspython3pre-trained

  Python

  •

  MIT License

  •11•15•2•0•Updated Oct 3, 2018Oct 3, 2018

• stl-to-voxel

  Public
  Turn STL files into voxels, images, and videos

  Python

  •

  MIT License

  •79•2•0•0•Updated Sep 24, 2018Sep 24, 2018

• tfs

  Public
  Microsoft TFS API Python client

  Python

  •

  MIT License

  •27•0•0•0•Updated Sep 12, 2018Sep 12, 2018