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@PredictiveEcology Predictive Ecology Group

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    149 repositories

    • reproducible

      Public
      A set of tools for R that enhance reproducibility beyond package management
      reproducible-researchr-packagereproducibility
      reproducible-researchr-packagereproducibility
      R
      •17•39•18•7•Updated Apr 30, 2026Apr 30, 2026

    • Require

      Public
      Simple R package to install and load packages conducive to a reproducible workflow
      R
      •7•24•9•1•Updated Apr 29, 2026Apr 29, 2026

    • LandRCBM_split3pools

      Public
      R
      •
      Other
      •1•0•3•1•Updated Apr 29, 2026Apr 29, 2026

    • CBM_core

      Public
      R
      •
      Other
      •4•0•6•0•Updated Apr 29, 2026Apr 29, 2026

    • CBM_vol2biomass

      Public
      R
      •
      Other
      •2•0•5•0•Updated Apr 29, 2026Apr 29, 2026

    • CBM_dataPrep

      Public
      R
      •0•0•1•0•Updated Apr 29, 2026Apr 29, 2026

    • CBM4r

      Public
      CBM4 in R
      0•0•0•0•Updated Apr 29, 2026Apr 29, 2026

    • SpaDES.project

      Public
      Project Templates Using 'SpaDES'
      R
      •9•4•11•4•Updated Apr 29, 2026Apr 29, 2026

    • DataDrivenModels_Manuscript

      Public
      methods/results code for manuscript in prep re: Biomass_speciesParams
      R
      •0•0•0•0•Updated Apr 29, 2026Apr 29, 2026

    • scfm

      Public
      Steve Cumming Fire Model (wildfire ignition, escape, and spread)
      simulation-modelingwildfire
      simulation-modelingwildfire
      R
      •8•2•10•0•Updated Apr 28, 2026Apr 28, 2026

    • PredictiveEcology.org

      Public
      A blog about prediction in ecology: the science, the complexity and the computation
      R
      •551•2•10•2•Updated Apr 28, 2026Apr 28, 2026

    • climateData

      Public
      Utilities for working with North American climate data from 'ClimateNA' https://climatena.ca
      R
      •
      GNU General Public License v3.0
      •2•0•8•1•Updated Apr 27, 2026Apr 27, 2026

    • fireSenseUtils

      Public
      Utilites for working with the 'fireSense' group of 'SpaDES' modules
      R
      •
      GNU General Public License v3.0
      •4•1•8•1•Updated Apr 23, 2026Apr 23, 2026

    • fireSense_dataPrepPredict

      Public
      R
      •
      Other
      •2•0•1•1•Updated Apr 23, 2026Apr 23, 2026

    • fireSense_SpreadPredict

      Public
      SpaDES module to predict fire spread probabilities
      spades-modulefiresense
      spades-modulefiresense
      HTML
      •
      Other
      •3•2•2•0•Updated Apr 22, 2026Apr 22, 2026

    • SpaDES.core

      Public
      Core functionality for Spatial Discrete Event Simulation (SpaDES)
      simulation-frameworkr-packagesimulation-modeling
      simulation-frameworkr-packagesimulation-modelingdiscrete-events-simulations
      R
      •
      GNU General Public License v3.0
      •20•11•32•5•Updated Apr 22, 2026Apr 22, 2026

    • burnSummaries

      Public
      HTML
      •
      Other
      •0•0•0•0•Updated Apr 22, 2026Apr 22, 2026

    • NRV_summary

      Public
      NRV simulation post-processing and summary creation.
      HTML
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Apr 22, 2026Apr 22, 2026

    • fireSense_IgnitionPredict

      Public
      Repository of fireSense_IgnitionPredict, a SpaDES module
      R
      •
      Other
      •3•1•2•0•Updated Apr 18, 2026Apr 18, 2026

    • fireSense_summary

      Public
      Summarizes the results of multiple fireSense simulations, across multiple study areas, climate scenarios, and replicates.
      R
      •
      GNU General Public License v3.0
      •0•0•2•0•Updated Apr 17, 2026Apr 17, 2026

    • fireSense_dataPrepFit

      Public
      HTML
      •
      Other
      •3•0•3•0•Updated Apr 16, 2026Apr 16, 2026

    • CBMutils

      Public
      Utilities for modelling carbon in R based on CBM-CFS3
      R
      •3•0•8•1•Updated Apr 16, 2026Apr 16, 2026

    • fireSense_ELFs

      Public
      Create and select Ecologically-based Low Fractal dimensional polygons (ELFs)
      R
      •
      Other
      •0•0•1•0•Updated Apr 16, 2026Apr 16, 2026

    • Biomass_core

      Public
      Core vegetation dynamics module for LandR. based on LANDIS-II Biomass Succession Extension v3.2.1
      HTML
      •
      Other
      •8•2•19•4•Updated Apr 15, 2026Apr 15, 2026

    • canClimateData

      Public
      Prepare Canadian historic and projected climate data for use with LandR.CS and fireSense
      R
      •2•0•2•0•Updated Apr 15, 2026Apr 15, 2026

    • filelock

      Public
      Cross platform file locking in R
      R
      •
      Other
      •8•0•0•0•Updated Apr 14, 2026Apr 14, 2026

    • simpleHarvestPlanning

      Public
      a (very) simple spatially explicit forest harvest module to interface with LandR
      R
      •
      Other
      •6•0•0•0•Updated Apr 14, 2026Apr 14, 2026

    • spadesCBM

      Public
      R
      •4•2•1•1•Updated Apr 14, 2026Apr 14, 2026

    • clusters

      Public
      Utilities to evaluate and optimize selection of clusters of machines for parallel R operations
      R
      •
      GNU General Public License v3.0
      •1•1•1•1•Updated Apr 10, 2026Apr 10, 2026

    • CBM_dataPrep_RIA

      Public
      HTML
      •
      Other
      •2•0•0•0•Updated Apr 8, 2026Apr 8, 2026
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