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    • CellVQ

      Public
      Python
      0600Updated Mar 27, 2026Mar 27, 2026
    • C
      MIT License
      42140Updated Sep 1, 2025Sep 1, 2025
    • dyAb

      Public
      The official implementation of the AAAI'25 paper "dyAb: Flow Matching for Flexible Antibody Design with AlphaFold-driven Pre-binding Antigen".
      Python
      MIT License
      21320Updated Apr 22, 2025Apr 22, 2025
    • GraphsGPT

      Public
      The official implementation of the ICML'24 paper "A Graph is Worth K Words: Euclideanizing Graph using Pure Transformer".
      Python
      74800Updated Mar 19, 2025Mar 19, 2025
    • MeToken

      Public
      Python
      MIT License
      1700Updated Jan 9, 2025Jan 9, 2025
    • R3Design

      Public
      C++
      2900Updated Nov 13, 2024Nov 13, 2024
    • Python
      42341Updated Nov 6, 2024Nov 6, 2024
    • Python
      1000Updated Oct 9, 2024Oct 9, 2024
    • Python
      1300Updated Oct 9, 2024Oct 9, 2024
    • The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics
      Python
      1120170Updated Sep 18, 2024Sep 18, 2024
    • A project template using Pytorch-Lightning
      Python
      2800Updated Sep 10, 2024Sep 10, 2024
    • RDesign

      Public
      The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-based RNA Design.
      Python
      25020Updated Aug 22, 2024Aug 22, 2024
    • RFold

      Public
      The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching Perspective..
      Python
      68930Updated Jul 20, 2024Jul 20, 2024
    • ADesigner

      Public
      The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.
      Python
      21130Updated Dec 28, 2023Dec 28, 2023
    • DiffSDS

      Public
      Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and Constraints".
      Jupyter Notebook
      21400Updated Jun 25, 2023Jun 25, 2023
    • The official implementation of the paper "MotifRetro: Exploring the Combinability-Consistency Trade-offs in retrosynthesis via Dynamic Motif Editing".
      Python
      01100Updated Jun 25, 2023Jun 25, 2023
    • PiFold

      Public
      The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.
      Python
      MIT License
      1918330Updated Jun 17, 2023Jun 17, 2023
    • PrefixMol

      Public
      The official implementation of the paper "PrefixMol: Target-and Chemistry-aware Molecule Design via Prefix Embedding".
      Python
      2900Updated Mar 12, 2023Mar 12, 2023
    • SimVP

      Public
      The official implementation of the CVPR'22 paper SimVP: Simpler Yet Better Video Prediction.
      Python
      51292140Updated Feb 21, 2023Feb 21, 2023
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