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This commit completely copies the logic in nextstrain_profiles/nextstrain-gisaid-21L/ to /nextstrain_profiles/nextstrain-open-21L/. Specific gisaid vs open changes etc... were derived by diffing the existing nextstrain-gisaid vs the existing nextstrain-open profiles. In addition, this commit: 1. Fixes reference traits and frequencies for nextstrain-gisaid-21L 2. Switches from Nextstrain_clade, eg "21H (Mu)", to clade_nextstrain, eg "21H" during prefilter.
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I'm usually using Tom's work-around for testing GitHub Action workflows that are not on the default branch. |
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Description of proposed changes
This PR copies the logic in
nextstrain_profiles/nextstrain-gisaid-21L/to/nextstrain_profiles/nextstrain-open-21L/. Specific gisaid vs open changes etc... were derived by diffing the existingnextstrain-gisaidvs the existingnextstrain-openprofiles.Testing
I've copied the existing
rebuild-gisaid-21L.ymlGitHub Action torebuild-open-21L.yml. However, I don't know how to run this as a test while this file is still on the branchopen-21Linstead ofmaster. Any advice here?Release checklist
docs/src/reference/change_log.mdin this pull request to document these changes by the date they were added.