Release 0.3.0

New features:

• predict now accepts HGNC symbols
• summarize now reports the maximum score of all sentences for each association
• summarize now allows to aggregate information per protein pair, regardless of association type and direction

Bug fixes:

• Fix massive memory consumption
• Fix incompatible dependencies between lxml and bioc

Release 0.2.1

This release splits PEDL's functionality into pedl predict and pedl summarize.

predict receives a new option --skip_reverse which omits the prediction from p2 to p1, which can be useful when the lists for p1 and p2 are the same.

Release 0.1.1

Release 0.1.1 is a bugfix release:

• Stop progress bars from cluttering the terminal
• Handle errors in requests to PubTator API
• Do not create empty files for pairs without any detected relation

Release v0.1.0

This is the first release of PEDL. The project is in an alpha state. It should be usable, but it is not ready for production.