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INDICATE Data Dictionary

Browse Catalog Documentation Funded by EU License: EUPL-1.2

Catalog Screenshot

This repository hosts the INDICATE Minimal Data Dictionary content as versioned JSON files, along with a static catalog to browse concept sets, concepts, and projects.

Context

The INDICATE project, funded by the European Union's Digital Europe Programme, aims to establish a secure federated infrastructure for standardized ICU data across 12 European countries. The Minimal Data Dictionary provides a consensus-based collection of 332 concept sets organized into 9 clinical categories (demographics, conditions, vital signs, laboratory measurements, microbiology, ventilation, drugs, procedures, clinical observations), built on the OMOP Common Data Model with SNOMED, LOINC, RxNorm, and UCUM terminologies.

Repository Structure

concept_sets/              # 332 JSON files — concept set definitions (OHDSI format + INDICATE metadata)
concept_sets_resolved/     # Resolved concept sets (generated by resolve.py)
projects/                  # 6 JSON files — clinical project definitions with linked concept sets
units/                     # Recommended units (CSV) and unit conversion tables
mapping_recommendations/   # Mapping recommendations (multilingual JSON)
docs/                      # GitHub Pages static catalog (single-page app)

Online Catalog

Browse Catalog

The GitHub Pages catalog provides a read-only interface with:

  • Concept Sets — Search, filter by category, and view OMOP concept details with Athena links
  • Mapping Recommendations — Multilingual mapping guidance for clinical concepts
  • Projects — Browse the 6 clinical use cases and their associated concept sets
  • Bilingual — English and French translations

Documentation

Documentation

Full documentation is available here, covering concept set structure, review workflows, export options, and more.

License

EUPL-1.2 — see LICENSE.

Acknowledgments

Funded by the European Union's Digital Europe Programme (grant 101167778).

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INDICATE Data Dictionary content: OHDSI-compliant concept sets and project definitions

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