Releases: gagnonanthony/NeuroStatX
Releases · gagnonanthony/NeuroStatX
v0.1.1
What's Changed
- [FIX] hotfix pipy details. by @gagnonanthony in #66
- Migrating to Astro by @gagnonanthony in #67
- Bump braces from 3.0.2 to 3.0.3 in /docs/starlight by @dependabot[bot] in #68
- add codeql workflow by @gagnonanthony in #69
- Bump withastro/action from 2 to 3 by @dependabot[bot] in #70
- Bump micromatch from 4.0.5 to 4.0.8 in /docs/starlight by @dependabot[bot] in #71
- Bump @pagefind/default-ui from 1.1.0 to 1.1.1 in /docs/starlight by @dependabot[bot] in #72
- Bump pagefind from 1.1.0 to 1.1.1 in /docs/starlight by @dependabot[bot] in #73
- Bump path-to-regexp from 6.2.2 to 6.3.0 in /docs/starlight by @dependabot[bot] in #75
- Bump dset from 3.1.3 to 3.1.4 in /docs/starlight by @dependabot[bot] in #74
- Bump vite from 5.2.11 to 5.4.6 in /docs/starlight by @dependabot[bot] in #76
- Small fixes to documentation by @gagnonanthony in #77
- Bump rollup from 4.21.3 to 4.22.4 in /docs/starlight by @dependabot[bot] in #78
- Bump astro from 4.8.6 to 4.16.3 in /docs/starlight by @dependabot[bot] in #79
- [ENH] Add Dockerfile for extended package portability by @gagnonanthony in #80
- Hotfix Docker workflow by @gagnonanthony in #81
- Bump docker/build-push-action from 5 to 6 by @dependabot[bot] in #82
- Bump codecov/codecov-action from 4 to 5 by @dependabot[bot] in #87
- Bump tornado from 6.4.1 to 6.4.2 by @dependabot[bot] in #88
- Bump nanoid from 3.3.7 to 3.3.8 in /docs/starlight by @dependabot[bot] in #89
- Bump astro from 4.16.3 to 4.16.18 in /docs/starlight by @dependabot[bot] in #90
- Bump vite from 5.4.11 to 5.4.14 in /docs/starlight by @dependabot[bot] in #91
- Bump jinja2 from 3.1.4 to 3.1.5 by @dependabot[bot] in #92
- Bump withastro/action from 3 to 4 by @dependabot[bot] in #93
- Replace labels in dependabot config by @gagnonanthony in #96
- Bump jinja2 from 3.1.5 to 3.1.6 by @dependabot[bot] in #95
- Bump @babel/helpers from 7.26.0 to 7.26.10 in /docs/starlight by @dependabot[bot] in #94
- Small fixes for verbose option cross-validation function by @gagnonanthony in #97
- Adding
Loaderinstances to load graph/datasets by @gagnonanthony in #98 - Bump vite from 5.4.14 to 5.4.17 in /docs/starlight by @dependabot[bot] in #99
- Bump esbuild, @astrojs/starlight and astro in /docs/starlight by @dependabot[bot] in #100
- Bump vite from 6.2.5 to 6.2.6 in /docs/starlight by @dependabot[bot] in #101
- Bump vite from 6.2.6 to 6.3.4 in /docs/starlight by @dependabot[bot] in #102
- Bump setuptools from 70.3.0 to 78.1.1 by @dependabot[bot] in #103
- Bump tornado from 6.4.2 to 6.5.1 by @dependabot[bot] in #104
- Bump requests from 2.32.3 to 2.32.4 by @dependabot[bot] in #105
- Bump urllib3 from 2.3.0 to 2.5.0 by @dependabot[bot] in #106
- Add new tutorials, models from paper, and documentation update by @gagnonanthony in #107
- Visual improvement of the tutorials and fix images imports. by @gagnonanthony in #108
- Bump astro from 5.6.1 to 5.12.8 in /docs/starlight by @dependabot[bot] in #109
- Bump actions/checkout from 4 to 5 by @dependabot[bot] in #110
- Bump astro from 5.12.8 to 5.13.2 in /docs/starlight by @dependabot[bot] in #111
- Bump actions/setup-python from 5 to 6 by @dependabot[bot] in #113
- Bump devalue from 5.1.1 to 5.3.2 in /docs/starlight by @dependabot[bot] in #112
- Bump vite from 6.3.4 to 6.3.6 in /docs/starlight by @dependabot[bot] in #114
- Bump pip from 24.3.1 to 25.2 by @dependabot[bot] in #115
- Bump github/codeql-action from 3 to 4 by @dependabot[bot] in #116
- Bump astro from 5.13.2 to 5.14.4 in /docs/starlight by @dependabot[bot] in #117
- Bump vite from 6.3.6 to 6.4.1 in /docs/starlight by @dependabot[bot] in #118
- FEAT: Fuzzy classes for PHQ-9 and GAD-7 scoring by @gagnonanthony in #119
- Bump withastro/action from 4 to 5 by @dependabot[bot] in #120
- Bump pip from 25.2 to 25.3 by @dependabot[bot] in #121
- Bump astro from 5.14.4 to 5.15.6 in /docs/starlight by @dependabot[bot] in #122
- Bump js-yaml from 4.1.0 to 4.1.1 in /docs/starlight by @dependabot[bot] in #123
- Bump astro from 5.15.6 to 5.15.9 in /docs/starlight by @dependabot[bot] in #124
- Bump actions/checkout from 5 to 6 by @dependabot[bot] in #125
- Bump fonttools from 4.57.0 to 4.61.0 by @dependabot[bot] in #126
- Bump mdast-util-to-hast from 13.2.0 to 13.2.1 in /docs/starlight by @dependabot[bot] in #127
- Bump urllib3 from 2.5.0 to 2.6.0 by @dependabot[bot] in #128
- Bump filelock from 3.18.0 to 3.20.1 by @dependabot[bot] in #129
- Bump urllib3 from 2.6.0 to 2.6.3 by @dependabot[bot] in #130
Full Changelog: v0.1.0...v0.1.1
v0.1.0
What's Changed
- Setting up basic files by @gagnonanthony in #1
- Adding preprocessing functions and steps by @gagnonanthony in #3
- Fix annotation with a limit for dataset over 10 var by @gagnonanthony in #4
- Improving readme by @gagnonanthony in #5
- Docs by @gagnonanthony in #6
- Adding support for multiple dataframe as input by @gagnonanthony in #7
- Adding demographic and/or medical history functionality. by @gagnonanthony in #8
- [WIP] Adding factorial analysis script by @gagnonanthony in #9
- Merging to typer CLI rather than argparse for prettier prints. by @gagnonanthony in #10
- [WIP] Adding confirmatory factorial analysis and horn's parallel analysis for more complete factorial analysis. by @gagnonanthony in #11
- Adding export of clean and removed rows when filtering datasets. by @gagnonanthony in #12
- Bump actions/checkout from 3 to 4 by @dependabot in #13
- Fuzzy clustering implementation by @gagnonanthony in #2
- [WIP] Adding Graph Network Analysis for Clustering Results. by @gagnonanthony in #14
- Bump pillow from 9.5.0 to 10.0.1 by @dependabot in #15
- Bump pip from 23.2.1 to 23.3 by @dependabot in #17
- Moving to skfuzzy, code linting and pep8speaks by @gagnonanthony in #18
- [WIP] New Graph Network Comparison Scripts and Analysis. by @gagnonanthony in #16
- Fix Distribution and Statistics Output in CCPM_compute_weighted_path.py by @gagnonanthony in #19
- [WIP] Moving to poetry as package manager. by @gagnonanthony in #21
- Update readme with poetry info by @gagnonanthony in #22
- Bump actions/setup-python from 4 to 5 by @dependabot in #23
- Bump jinja2 from 3.1.2 to 3.1.3 by @dependabot in #24
- Bump pillow from 10.1.0 to 10.2.0 by @dependabot in #25
- [ENH] New CI workflow setup by @gagnonanthony in #27
- [WIP] Add Partial Least Square Regression Analysis between Nodes Attributes and Edges Weights. by @gagnonanthony in #20
- [ENH] Add unit testing for individual function to improve coverage. by @gagnonanthony in #31
- [ENH] Moving to Cyclopts + Refactoring by @gagnonanthony in #32
- [ENH] Add package documentation by @gagnonanthony in #33
- [FIX] Documentation deployment by @gagnonanthony in #34
- [FIX] Fix deployment action by @gagnonanthony in #35
- [FIX] Add package installation to deploy workflow by @gagnonanthony in #36
- [ENH] Split compute graph network script and bake positions within the graph file. by @gagnonanthony in #40
- [ENH] Minor adjustments and improvements to scripts. by @gagnonanthony in #44
- [ENH] Add imputation and harmonisation functions. by @gagnonanthony in #45
- [ENH] Improve visualization functions for a publication-ready look. by @gagnonanthony in #47
- [FIX] Fix minors issues in visualization scripts. by @gagnonanthony in #48
- [ENH] Remove the need for datasets once graph file is generated. by @gagnonanthony in #49
- [DOC] Fix documentation in CLI scripts + plsr functions. by @gagnonanthony in #50
- Bump pillow from 10.2.0 to 10.3.0 by @dependabot in #52
- Bump idna from 3.6 to 3.7 by @dependabot in #53
- Bump jinja2 from 3.1.3 to 3.1.4 by @dependabot in #55
- Bump tqdm from 4.66.2 to 4.66.3 by @dependabot in #54
- [ENH] Add logistic regression script. by @gagnonanthony in #51
- [ENH] Renaming CCPM -> NeuroStatX by @gagnonanthony in #56
- Bump requests from 2.31.0 to 2.32.0 by @dependabot in #57
- Bump tornado from 6.4 to 6.4.1 by @dependabot in #58
- [FIX] Fix differences in returned score permutation testing compared to sklearn implementation. by @gagnonanthony in #59
- [ENH] Removing test scripts from coverage by @gagnonanthony in #60
- [ENH] Update dependencies, switch to in-project venv + small fixes by @gagnonanthony in #62
- Bump certifi from 2024.6.2 to 2024.7.4 by @dependabot in #61
- [ENH] Update poetry dynamic versioning by @gagnonanthony in #63
- Bump setuptools from 69.5.1 to 70.0.0 by @dependabot in #64
- [FIX] Small fixes for documentation build. by @gagnonanthony in #65
New Contributors
- @gagnonanthony made their first contribution in #1
- @dependabot made their first contribution in #13
Full Changelog: https://github.com/gagnonanthony/NeuroStatX/commits/v0.1.0