v0.1.1

What's Changed

• [FIX] hotfix pipy details. by @gagnonanthony in #66
• Migrating to Astro by @gagnonanthony in #67
• Bump braces from 3.0.2 to 3.0.3 in /docs/starlight by @dependabot[bot] in #68
• add codeql workflow by @gagnonanthony in #69
• Bump withastro/action from 2 to 3 by @dependabot[bot] in #70
• Bump micromatch from 4.0.5 to 4.0.8 in /docs/starlight by @dependabot[bot] in #71
• Bump @pagefind/default-ui from 1.1.0 to 1.1.1 in /docs/starlight by @dependabot[bot] in #72
• Bump pagefind from 1.1.0 to 1.1.1 in /docs/starlight by @dependabot[bot] in #73
• Bump path-to-regexp from 6.2.2 to 6.3.0 in /docs/starlight by @dependabot[bot] in #75
• Bump dset from 3.1.3 to 3.1.4 in /docs/starlight by @dependabot[bot] in #74
• Bump vite from 5.2.11 to 5.4.6 in /docs/starlight by @dependabot[bot] in #76
• Small fixes to documentation by @gagnonanthony in #77
• Bump rollup from 4.21.3 to 4.22.4 in /docs/starlight by @dependabot[bot] in #78
• Bump astro from 4.8.6 to 4.16.3 in /docs/starlight by @dependabot[bot] in #79
• [ENH] Add Dockerfile for extended package portability by @gagnonanthony in #80
• Hotfix Docker workflow by @gagnonanthony in #81
• Bump docker/build-push-action from 5 to 6 by @dependabot[bot] in #82
• Bump codecov/codecov-action from 4 to 5 by @dependabot[bot] in #87
• Bump tornado from 6.4.1 to 6.4.2 by @dependabot[bot] in #88
• Bump nanoid from 3.3.7 to 3.3.8 in /docs/starlight by @dependabot[bot] in #89
• Bump astro from 4.16.3 to 4.16.18 in /docs/starlight by @dependabot[bot] in #90
• Bump vite from 5.4.11 to 5.4.14 in /docs/starlight by @dependabot[bot] in #91
• Bump jinja2 from 3.1.4 to 3.1.5 by @dependabot[bot] in #92
• Bump withastro/action from 3 to 4 by @dependabot[bot] in #93
• Replace labels in dependabot config by @gagnonanthony in #96
• Bump jinja2 from 3.1.5 to 3.1.6 by @dependabot[bot] in #95
• Bump @babel/helpers from 7.26.0 to 7.26.10 in /docs/starlight by @dependabot[bot] in #94
• Small fixes for verbose option cross-validation function by @gagnonanthony in #97
• Adding Loader instances to load graph/datasets by @gagnonanthony in #98
• Bump vite from 5.4.14 to 5.4.17 in /docs/starlight by @dependabot[bot] in #99
• Bump esbuild, @astrojs/starlight and astro in /docs/starlight by @dependabot[bot] in #100
• Bump vite from 6.2.5 to 6.2.6 in /docs/starlight by @dependabot[bot] in #101
• Bump vite from 6.2.6 to 6.3.4 in /docs/starlight by @dependabot[bot] in #102
• Bump setuptools from 70.3.0 to 78.1.1 by @dependabot[bot] in #103
• Bump tornado from 6.4.2 to 6.5.1 by @dependabot[bot] in #104
• Bump requests from 2.32.3 to 2.32.4 by @dependabot[bot] in #105
• Bump urllib3 from 2.3.0 to 2.5.0 by @dependabot[bot] in #106
• Add new tutorials, models from paper, and documentation update by @gagnonanthony in #107
• Visual improvement of the tutorials and fix images imports. by @gagnonanthony in #108
• Bump astro from 5.6.1 to 5.12.8 in /docs/starlight by @dependabot[bot] in #109
• Bump actions/checkout from 4 to 5 by @dependabot[bot] in #110
• Bump astro from 5.12.8 to 5.13.2 in /docs/starlight by @dependabot[bot] in #111
• Bump actions/setup-python from 5 to 6 by @dependabot[bot] in #113
• Bump devalue from 5.1.1 to 5.3.2 in /docs/starlight by @dependabot[bot] in #112
• Bump vite from 6.3.4 to 6.3.6 in /docs/starlight by @dependabot[bot] in #114
• Bump pip from 24.3.1 to 25.2 by @dependabot[bot] in #115
• Bump github/codeql-action from 3 to 4 by @dependabot[bot] in #116
• Bump astro from 5.13.2 to 5.14.4 in /docs/starlight by @dependabot[bot] in #117
• Bump vite from 6.3.6 to 6.4.1 in /docs/starlight by @dependabot[bot] in #118
• FEAT: Fuzzy classes for PHQ-9 and GAD-7 scoring by @gagnonanthony in #119
• Bump withastro/action from 4 to 5 by @dependabot[bot] in #120
• Bump pip from 25.2 to 25.3 by @dependabot[bot] in #121
• Bump astro from 5.14.4 to 5.15.6 in /docs/starlight by @dependabot[bot] in #122
• Bump js-yaml from 4.1.0 to 4.1.1 in /docs/starlight by @dependabot[bot] in #123
• Bump astro from 5.15.6 to 5.15.9 in /docs/starlight by @dependabot[bot] in #124
• Bump actions/checkout from 5 to 6 by @dependabot[bot] in #125
• Bump fonttools from 4.57.0 to 4.61.0 by @dependabot[bot] in #126
• Bump mdast-util-to-hast from 13.2.0 to 13.2.1 in /docs/starlight by @dependabot[bot] in #127
• Bump urllib3 from 2.5.0 to 2.6.0 by @dependabot[bot] in #128
• Bump filelock from 3.18.0 to 3.20.1 by @dependabot[bot] in #129
• Bump urllib3 from 2.6.0 to 2.6.3 by @dependabot[bot] in #130

Full Changelog: v0.1.0...v0.1.1

v0.1.0

What's Changed

• Setting up basic files by @gagnonanthony in #1
• Adding preprocessing functions and steps by @gagnonanthony in #3
• Fix annotation with a limit for dataset over 10 var by @gagnonanthony in #4
• Improving readme by @gagnonanthony in #5
• Docs by @gagnonanthony in #6
• Adding support for multiple dataframe as input by @gagnonanthony in #7
• Adding demographic and/or medical history functionality. by @gagnonanthony in #8
• [WIP] Adding factorial analysis script by @gagnonanthony in #9
• Merging to typer CLI rather than argparse for prettier prints. by @gagnonanthony in #10
• [WIP] Adding confirmatory factorial analysis and horn's parallel analysis for more complete factorial analysis. by @gagnonanthony in #11
• Adding export of clean and removed rows when filtering datasets. by @gagnonanthony in #12
• Bump actions/checkout from 3 to 4 by @dependabot in #13
• Fuzzy clustering implementation by @gagnonanthony in #2
• [WIP] Adding Graph Network Analysis for Clustering Results. by @gagnonanthony in #14
• Bump pillow from 9.5.0 to 10.0.1 by @dependabot in #15
• Bump pip from 23.2.1 to 23.3 by @dependabot in #17
• Moving to skfuzzy, code linting and pep8speaks by @gagnonanthony in #18
• [WIP] New Graph Network Comparison Scripts and Analysis. by @gagnonanthony in #16
• Fix Distribution and Statistics Output in CCPM_compute_weighted_path.py by @gagnonanthony in #19
• [WIP] Moving to poetry as package manager. by @gagnonanthony in #21
• Update readme with poetry info by @gagnonanthony in #22
• Bump actions/setup-python from 4 to 5 by @dependabot in #23
• Bump jinja2 from 3.1.2 to 3.1.3 by @dependabot in #24
• Bump pillow from 10.1.0 to 10.2.0 by @dependabot in #25
• [ENH] New CI workflow setup by @gagnonanthony in #27
• [WIP] Add Partial Least Square Regression Analysis between Nodes Attributes and Edges Weights. by @gagnonanthony in #20
• [ENH] Add unit testing for individual function to improve coverage. by @gagnonanthony in #31
• [ENH] Moving to Cyclopts + Refactoring by @gagnonanthony in #32
• [ENH] Add package documentation by @gagnonanthony in #33
• [FIX] Documentation deployment by @gagnonanthony in #34
• [FIX] Fix deployment action by @gagnonanthony in #35
• [FIX] Add package installation to deploy workflow by @gagnonanthony in #36
• [ENH] Split compute graph network script and bake positions within the graph file. by @gagnonanthony in #40
• [ENH] Minor adjustments and improvements to scripts. by @gagnonanthony in #44
• [ENH] Add imputation and harmonisation functions. by @gagnonanthony in #45
• [ENH] Improve visualization functions for a publication-ready look. by @gagnonanthony in #47
• [FIX] Fix minors issues in visualization scripts. by @gagnonanthony in #48
• [ENH] Remove the need for datasets once graph file is generated. by @gagnonanthony in #49
• [DOC] Fix documentation in CLI scripts + plsr functions. by @gagnonanthony in #50
• Bump pillow from 10.2.0 to 10.3.0 by @dependabot in #52
• Bump idna from 3.6 to 3.7 by @dependabot in #53
• Bump jinja2 from 3.1.3 to 3.1.4 by @dependabot in #55
• Bump tqdm from 4.66.2 to 4.66.3 by @dependabot in #54
• [ENH] Add logistic regression script. by @gagnonanthony in #51
• [ENH] Renaming CCPM -> NeuroStatX by @gagnonanthony in #56
• Bump requests from 2.31.0 to 2.32.0 by @dependabot in #57
• Bump tornado from 6.4 to 6.4.1 by @dependabot in #58
• [FIX] Fix differences in returned score permutation testing compared to sklearn implementation. by @gagnonanthony in #59
• [ENH] Removing test scripts from coverage by @gagnonanthony in #60
• [ENH] Update dependencies, switch to in-project venv + small fixes by @gagnonanthony in #62
• Bump certifi from 2024.6.2 to 2024.7.4 by @dependabot in #61
• [ENH] Update poetry dynamic versioning by @gagnonanthony in #63
• Bump setuptools from 69.5.1 to 70.0.0 by @dependabot in #64
• [FIX] Small fixes for documentation build. by @gagnonanthony in #65

New Contributors

• @gagnonanthony made their first contribution in #1
• @dependabot made their first contribution in #13

Full Changelog: https://github.com/gagnonanthony/NeuroStatX/commits/v0.1.0