2.3.1

What's Changed

• fix: add disable_healthcheck kwarg to create_dataproxy by @korikuzma in #613

Full Changelog: 2.3.0...2.3.1

2.3.0

What's Changed

• Integrate Hackathon vrs-in-a-box into vrs-python by @ehclark in #555
• Remove vcf annotator healthcheck by @theferrit32 in #569
• Update hgvs dependency to >=1.5.5,<2.0 by @SalemBajjali in #606
• build: remove unused/redundant deps by @korikuzma in #607
• feat: add extension fetcher method by @jsstevenson in #611
• chore: add pyrefly-inferred type annotations by @jsstevenson in #597

Full Changelog: 2.2.0...2.3.0

2.2.0

What's Changed

• feat: add deprecation warning for beacon translation by @korikuzma in #578
• docs: add more info for docker commands by @korikuzma in #566
• Add vcr_config to conftest to filter headers and auto-decompress resp… by @theferrit32 in #591
• VCF support for RLE and fix to same-as-reference allele normalization to RLE by @theferrit32 in #589

Full Changelog: 2.1.4...2.2.0

Associated Discussion

Deprecating 2.x releases pre 2.2.0: #603

2.1.4

What's Changed

• fix: use correct error message for ref vs actual ref by @jsstevenson in #559
• fix(docs): use correct link for forks by @korikuzma in #573
• fix(test): rename schema -> schema_name to resolve UserWarning by @korikuzma in #574
• build: temporarily pin hgvs by @korikuzma in #580
• fix(notebooks): update notebooks to use vrs 2.x by @korikuzma in #576
• build: pin pysam 0.23.0 to avoid pytest-cov bug by @jsstevenson in #585
• chore: make optional fields visible to type checkers by @jsstevenson in #583
• fix: use correct model validator signature by @jsstevenson in #586

Full Changelog: 2.1.3...2.1.4

2.1.3

What's Changed

• chore(lint): enforce ruff pyupgrade (UP) rules by @korikuzma in #562

Full Changelog: 2.1.2...2.1.3

2.1.2

What's Changed

• VCF Annotator CLI support for reading/writing stdin/stdout by @theferrit32 in #531
• fix-logging-warnings by @ottojolanki in #552

New Contributors

• @ottojolanki made their first contribution in #552

Full Changelog: 2.1.1...2.1.2

2.1.1

What's Changed

• Fix allele translator to_spdi issue for RLE deletion by @theferrit32 in #542

Full Changelog: 2.1.0...2.1.1

2.1.0

What's Changed

• feat: add version to annotated vcf by @jsstevenson in #541
• feat: define VRS schema version in package by @jsstevenson in #543
• feat: add optional suppression of allele collection by @jsstevenson in #545

Full Changelog: 2.0.1...2.1.0

2.0.1

What's Changed

• build: declare python 3.13 support by @jsstevenson in #536
• chore: ignore uv.lock by @jsstevenson in #535
• Docker compose docs by @melissacline in #532
• Add missing dependencies by @david4096 in #533
• cicd: do not install setuptools by @jsstevenson in #539

New Contributors

• @melissacline made their first contribution in #532
• @david4096 made their first contribution in #533

Full Changelog: 2.0.0...2.0.1

2.0.0

What's Changed

• feat!: refactor annotator as ABC, add NDJSON annotation + support optional side effects by @jsstevenson in #502
• chore: update seqrepo and uta versions to 2024-12-20 by @korikuzma in #514
• feat!: update models to VRS 2.0.1 by @korikuzma in #518
• docs: clarify fork procedure for devs by @jsstevenson in #458
• feat!: show more informative error msg for vcf annotate output args issue by @jsstevenson in #520
• fix: use POSIX/GNU conventions for option word separators by @jsstevenson in #521
• fix: ensure dataproxy env var works in CLI by @jsstevenson in #523
• fix: use integers for numeric INFO attributes by @jsstevenson in #519
• docs: add instructions for using podman with vs code dev containers by @korikuzma in #524
• chore: remove unused pylint config by @jsstevenson in #525

Note

Originally, VRS-Python major version was going to follow the VRS major version. To prepare for VRS 2.0.0, we created 2.0.0-alpha releases. However, the developer team has decided not to follow approach anymore. Instead, VRS-Python will be following semantic versioning. We will be skipping a 1.0.0 release and will be going straight to 2.0.0.

Full Changelog: 2.0.0-a14...2.0.0