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Create framework for upcoming dbGaP chapter#34

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ehumph merged 11 commits into
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create-framework-for-dbgap-section
May 1, 2026
Merged

Create framework for upcoming dbGaP chapter#34
ehumph merged 11 commits into
mainfrom
create-framework-for-dbgap-section

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@ehumph

@ehumph ehumph commented Apr 28, 2026

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Because we have a lot of interest in connecting dbGaP datasets to AnVIL, this PR sets up the framework for a vignette about getting data from dbGaP. It also creates a very general stub that directs people to link their dbGaP credentials with the AnVIL account.

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github-actions Bot commented Apr 28, 2026

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No spelling errors! 🎉
Comment updated at 2026-05-01-16:28:55 with changes from 9348a6c

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No broken url errors! 🎉
Comment updated at 2026-05-01-16:28:54 with changes from 9348a6c

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Re-rendered previews from the latest commit:

* note not all html features will be properly displayed in the "quick preview" but it will give you a rough idea.

Updated at 2026-05-01 with changes from the latest commit 9348a6c

@avahoffman avahoffman left a comment

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Looks good so far!

Comment thread 01-intro.Rmd Outdated
Comment thread 04-accessing_controlled_data_dbGaP.Rmd Outdated
ehumph and others added 5 commits May 1, 2026 10:23
Co-authored-by: ava 🌱 <avamariehoffman@gmail.com>
Co-authored-by: ava 🌱 <avamariehoffman@gmail.com>
@ehumph ehumph merged commit a9b2a4e into main May 1, 2026
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2 participants