Skip to content

Fill in more of the practice section in final chapter#53

Merged
kweav merged 6 commits into
mainfrom
kweav-fillMorePractice
Jul 7, 2026
Merged

Fill in more of the practice section in final chapter#53
kweav merged 6 commits into
mainfrom
kweav-fillMorePractice

Conversation

@kweav

@kweav kweav commented Jul 6, 2026

Copy link
Copy Markdown
Contributor

Added various communities and data visualization challenges as well as a couple of papers that have data available to visualize model performance, comparing predictions to known/observed values.

Added a caption within a thinking box with a prompt to have learners try to write a caption.

Moved the summary and checklist to the end and practice up earlier

Added descriptions of the boxes for that section per issue #40 as well as fixed a syntax issue with the accessibility box

kweav added 2 commits July 6, 2026 19:24
Added two new articles to the bibliography with detailed metadata including titles, authors, journals, and DOIs.
Updated the section on data visualization practices, emphasizing understanding and readability. Added examples of using data visualization in bioinformatics for model validation.
@github-actions

github-actions Bot commented Jul 6, 2026

Copy link
Copy Markdown
Contributor

OTTR Check Results

Summary

  • Spelling check: ✅ PASSED (0 errors found, threshold: 0)
  • URL check: ✅ PASSED (0 errors found, threshold: 0)

🎉 All checks passed!

Last Updated: 2026-07-07-18:56:32

@github-actions

github-actions Bot commented Jul 6, 2026

Copy link
Copy Markdown
Contributor

Re-rendered previews from the latest commit:

* note not all html features will be properly displayed in the "quick preview" but it will give you a rough idea.

Updated at 2026-07-07 with changes from the latest commit a3a0920

kweav added 3 commits July 7, 2026 11:39
Updated the reflection prompt to emphasize detailed caption writing and revised the example caption for clarity. Also synced the style with other reflection prompts
@kweav

kweav commented Jul 7, 2026

Copy link
Copy Markdown
Contributor Author
image

What the style box description looks like

@kweav kweav requested a review from carriewright11 July 7, 2026 17:23
Comment thread 07_wrapping_up.qmd Outdated
Comment thread 07_wrapping_up.qmd Outdated
Comment thread 07_wrapping_up.qmd Outdated
Comment thread 07_wrapping_up.qmd Outdated
Comment thread 07_wrapping_up.qmd Outdated
Co-authored-by: Carrie Wright <23014755+carriewright11@users.noreply.github.com>
Comment thread 07_wrapping_up.qmd

<div class = "accessibility">

When using color to distinguish groups, to increase accessibility, use tools to check your color palette to see if the colors can be distinguished by those with color vision deficiency.

Copy link
Copy Markdown
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Suggested change
When using color to distinguish groups, to increase accessibility, use tools to check your color palette to see if the colors can be distinguished by those with color vision deficiency.
When using color to distinguish groups, to increase accessibility, use tools (such as this [simulator](https://www.color-blindness.com/coblis-color-blindness-simulator/)to check your color palette to see if the colors can be distinguished by those with color vision deficiency. Use color pallets that were designed for color deficiency such as [viridis in R](https://cran.r-project.org/web/packages/viridis/vignettes/intro-to-viridis.html) and [python](https://matplotlib.org/stable/users/explain/colors/colormaps.html).

Copy link
Copy Markdown
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I was going to add a tip box when I wrote that section later today or tomorrow to point them to the section with that info. But if you'd like more info here, I can expand it

Copy link
Copy Markdown
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I've referenced this suggestion in an issue to make sure I handle this improvement

@carriewright11 carriewright11 left a comment

Copy link
Copy Markdown
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

looks good! just had some minor suggestions

@kweav kweav merged commit 91f2dbc into main Jul 7, 2026
8 checks passed
@kweav kweav deleted the kweav-fillMorePractice branch July 7, 2026 19:02
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants