GitHub - elittlestone/SC_RNA_SEQ: Single cell rna-seq analysis for USF Bioinformatician role

Name		Name	Last commit message	Last commit date
Latest commit History 54 Commits
results		results
.gitattributes		.gitattributes
.gitignore		.gitignore
.nojekyll		.nojekyll
AL02_filtered_feature_bc_matrix.h5		AL02_filtered_feature_bc_matrix.h5
AL03_filtered_feature_bc_matrix.h5		AL03_filtered_feature_bc_matrix.h5
USF_SC_RNA_SEQ_ANALYSIS.Rproj		USF_SC_RNA_SEQ_ANALYSIS.Rproj
config.yml		config.yml
download_ref_and_run_cellranger.smk		download_ref_and_run_cellranger.smk
download_sra_files.smk		download_sra_files.smk
geo_single_cell_rna_analysis.qmd		geo_single_cell_rna_analysis.qmd
import_10x_data.py		import_10x_data.py
index.qmd		index.qmd
integrate_samples.py		integrate_samples.py
integrate_samples.smk		integrate_samples.smk
pixi.lock		pixi.lock
pixi.toml		pixi.toml
qc_scanpy.py		qc_scanpy.py
scanpy.smk		scanpy.smk

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Single cell rna-seq analysis for USF Bioinformatician role

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