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6 changes: 6 additions & 0 deletions NEWS.md
Original file line number Diff line number Diff line change
@@ -1,3 +1,9 @@
# ubms 1.2.9 (development)

* Updated compatibility with upcoming changes to `loo_compare()` output
structure in the `loo` package (> 2.9.0), which now returns a data frame
instead of a matrix and includes additional diagnostic columns.

# ubms 1.2.8

* Add probs argument to summary method
Expand Down
13 changes: 10 additions & 3 deletions R/fitlist.R
Original file line number Diff line number Diff line change
Expand Up @@ -53,8 +53,15 @@ setMethod("modSel", "ubmsFitList", function(object, ...){
loos <- lapply(object@models, function(x) x@loo)
elpd <- sapply(loos, function(x) x$estimates[1])
p_loo <- sapply(loos, function(x) x$estimates[2])
compare <- loo::loo_compare(loos)[names(elpd),]
out <- data.frame(elpd=elpd, nparam=p_loo, elpd_diff=compare[,1],
se_diff=compare[,2])
compare <- loo::loo_compare(loos)
if ("model" %in% colnames(compare)) {
compare <- compare[match(names(elpd), compare$model),]
out <- data.frame(elpd=elpd, nparam=p_loo, elpd_diff=compare[,2],
se_diff=compare[,3])
} else {
compare <- loo::loo_compare(loos)[names(elpd),]
out <- data.frame(elpd=elpd, nparam=p_loo, elpd_diff=compare[,1],
se_diff=compare[,2])
}
out[order(out$elpd_diff, decreasing=TRUE),]
})
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