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delpiomat edited this page Sep 1, 2015 · 2 revisions

Welcome to the Victor/Phylo wiki!

Victor (Virtual Construction Toolkit for Proteins) and Phylo Library.

Victor is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

Victor is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with Victor. If not, see http://www.gnu.org/licenses/.

The Phylo library contain some features for manipulate FASTA files The 3 main components are:

  • NewickTree - Use information and sequnences stored in FASTA file for create Phylogenic tree. Can create trees with UPGMA or Neighbour Join.

  • PhyloSupport - This class contains static fields (functions and variables) for support the other class in Phylo.

  • ClustalW - Start from a Guide Tree, created whit NJ, this Class do a multiple alignament with CluastalW

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Victor Phylo Wiki by Victor is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.

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