README

Prototype dashboard for viewing water quality parameters around FL.

Data shown is ingested from multiple providers through processes documented in https://github.com/USF-IMARS/FCRWQDC-SEACAR-analysis.

Older versions of this file were prepared with https://github.com/USF-IMARS/FCRWQDC_data_ingest.

For this application to work the files produced by the upstream data processing must be placed in the ./data/ directory. These files are not tracked using git due to the large size of the files.

cp ../FCRWQDC-SEACAR-analysis/data/exports/dashboardStations.csv ./data/.
cp -R ../FCRWQDC-SEACAR-analysis/data/exports/stationData ./data/.

The files must be referenced in R code in order for the RStudio shinyapps pub interface to pick them up. To accomplish this run the following after putting the stationData files in place:

printf '# Station data files - referenced here so shinyapps.io bundles them\nstationFiles <- c(\n' > listOfStationFiles.R
ls data/stationData/ | awk 'NR>1{print prev","} {prev="  \"data/stationData/"$0"\""} END{print prev}' >> listOfStationFiles.R
printf ')\n' >> listOfStationFiles.R

Testing

source("./run_tests.R")

Attributions

This dashboard was based on TBEP's wq-dashboard. Info below is held over from that repo.

Materials for TBEP water quality dashboard.

Shiny

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Data shown here has undergone multiple iterations of ingestion, analysis, and cleaning. Some data cleaning is documented in USF-IMaRS/WIN_data_ingest.

Older analyses include:

• older data compilation efforts using data from previous years
• comparison of older data to data from SEACAR