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Global Fisheries Hg

Code used for the publication Li et al. 2023 (in review).

Associated data can be found via Dataverse: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/KVC2WH and downloaded to the "data" folder, which is used by the notebook "analysis.ipynb".

Python 3 Package Requirements (version used):

  • cartopy (0.22.0)
  • matplotlib (3.7.2)
  • numpy (1.24.3)
  • pandas (1.3.3)
  • scipy (1.9.3)
  • shapefile (2.3.1)
  • shapely (2.0.1)
  • xarray (0.19.0)

No special installation is required. Installing above packages normally takes a few minutes.

analysis.ipynb can be executed pointing to the analogous uncertainty scenario data downloaded from Dataverse (the scenario_data.zip file) and extracted to the "scenario_data" folder. The notebook contains expected output by default. The entire analysis may take about 20 minutes on a "normal" desktop computer.

Other routines and functions are included in "catchtools.py"

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