Image reconstruction and processing of qualitative and quantitative MR raw data acquired at field strength ranging from 55mT to 0.6T.
The raw k-space data and reconstructed image data can be found at the following repositories:
- i3M (Valencia, Spain), Physio1
- IBT-CMR (Zurich, Switzerland), Philips Ingenia Ambition X, ramped down to 0.6T
- PUC (Santiago de Chile, Chile), Siemens MAGNETOM Free.Max 0.55T
- Leiden University Medical Center (Leiden, The Netherlands)
We demonstrate how the provided data can be reconstructed with these reconstruction packages:
To install all these packages in the same environment, we provide a Dockerfile. Simply build the Docker image
docker build -t qmri_data .
start the container with a mapped folder to save the obtained figure in
docker run --rm -it -v /output:/output qmri_data
activate the environment
conda activate reco_env
and then run any of the reconstruction scripts
python recon_scripts/compare_recon_packages.py
python recon_scripts/compare_t2_mapping.py
python recon_scripts/compare_trajectories.py