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@MASILab

MASI Lab @ Vanderbilt

Medical-image Analysis and Statistical Interpretation (MASI)

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  1. SLANTbrainSeg SLANTbrainSeg Public

    Deep Whole Brain Segmentation Using SLANT Method

    Python 129 34

  2. SynSeg-Net SynSeg-Net Public

    SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth

    Python 70 18

  3. Synb0-DISCO Synb0-DISCO Public

    Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps

    Python 85 33

  4. ALARM ALARM Public

    8 2

  5. Pandora-WhiteMatterAtlas Pandora-WhiteMatterAtlas Public

    10 2

Repositories

Showing 10 of 184 repositories
  • xnat-staging-pipeline Public

    Manifest-driven pipeline to stage symlink-heavy DICOM trees into Subject/Session/Series structure, optionally zip sessions per subject, sync reliably with resumable rsync + ledgers, and generate Xnatupload (DAX) CSVs for XNAT ingestion

    MASILab/xnat-staging-pipeline’s past year of commit activity
    0 0 0 0 Updated Feb 27, 2026
  • AtlasToDiffusionReg Public

    singularity to register an atlas to the diffusion space of a subject

    MASILab/AtlasToDiffusionReg’s past year of commit activity
    Jupyter Notebook 2 0 1 0 Updated Feb 26, 2026
  • FLAIR_Tract Public

    FLAIR Tractography without subject-specific anatomical context.

    MASILab/FLAIR_Tract’s past year of commit activity
    Python 0 0 0 0 Updated Feb 25, 2026
  • insertion_network Public
    MASILab/insertion_network’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 13, 2026
  • PreQual Public

    An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images

    MASILab/PreQual’s past year of commit activity
    Python 54 10 1 2 Updated Feb 11, 2026
  • surface_distance Public

    Code for calculating mean absolute surface distance.

    MASILab/surface_distance’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 11, 2026
  • Informatics_ADSP Public
    MASILab/Informatics_ADSP’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 11, 2026
  • spherical_deep_fixel Public Forked from MASILab/deep_fixel

    DeepFixel: Deep learning-based identification of crossing fiber bundle elements

    MASILab/spherical_deep_fixel’s past year of commit activity
    Python 0 MIT 2 0 0 Updated Feb 11, 2026
  • SPIE2026_DermIDS Public
    MASILab/SPIE2026_DermIDS’s past year of commit activity
    Shell 1 0 0 0 Updated Feb 6, 2026
  • ADSP_AutoQA Public

    Automated QA for ADSP processing

    MASILab/ADSP_AutoQA’s past year of commit activity
    Python 5 MIT 2 2 1 Updated Jan 21, 2026
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People

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