Skip to content

Jenner compatibility tests for 2 script(s)#1

Open
lwsinclair wants to merge 1 commit into
GerkeLab:masterfrom
lwsinclair:jenner-check/initial-bundles
Open

Jenner compatibility tests for 2 script(s)#1
lwsinclair wants to merge 1 commit into
GerkeLab:masterfrom
lwsinclair:jenner-check/initial-bundles

Conversation

@lwsinclair

Copy link
Copy Markdown

Jenneranalytics.com provides an API that runs SAS code, with support for more than 200 SAS procedures. You can also use it with Anthropic Claude Code AI in a collaborative workspace. It's available for Mac on the Apple App Store, and by license for Windows and Linux. Your SAS code here runs on it unmodified — this PR adds a couple of compatibility bundles built straight from your %create_sample macros so you can see for yourself.

This PR adds a jenner-check/ directory; nothing else in the repo is touched.

jenner-check/
├── README.md
├── run_jenner.sh        # mac/linux: needs only bash + curl
├── run_jenner.bat       # Windows
├── run_jenner.sas       # drive from base SAS via PROC HTTP
├── t001_gformula_create_sample_binsurv/   # from example1.sas
└── t002_gformula_create_sample_bmi/       # from example2.sas

Each bundle is the simulated-cohort generator from one of your SAS-examples programs, run end to end through the Jenner API down to its PROC MEANS summary. To reproduce: cd jenner-check && ./run_jenner.sh --all (or paste a script.sas into the hosted workspace).

What stood out reading the examples: the %create_sample macros are a genuinely tidy way to stand up a longitudinal cohort — the seeded streaminit, the covariate arrays carried forward as one- and two-period lags, and the do…until truncation at the first event give you a reproducible test dataset without shipping any PHI. The %if/%else event branching in example2 that compiles a different truncation condition and end-of-follow-up outcome per outcome type is a clean touch. Both ran through Jenner unmodified, lags, conditional macro logic, and all.

Merge it, close it, or ignore it — whatever's useful to you; no response expected. To opt out of any future PRs from us, reply with no-more-prs anywhere in a comment, or open an issue titled jenner-check: opt out.


Lawrence W. Sinclair
CEO / Jenner Analytics Ltd
jenneranalytics.com
linkedin.com/in/lwsinclair/

Bundles derived from the %create_sample data-simulation macros in
SAS-examples/gformula-052919 (example1.sas, example2.sas). Each runs the
seeded longitudinal-cohort generator through the Jenner API down to its
PROC MEANS summary. Includes the bash/Windows/SAS runners and a README.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant