Installation fails with conflicting dependencies error#7
Open
mscheremetjew wants to merge 2 commits into
Open
Conversation
added 2 commits
May 18, 2026 15:12
… README.md, and requirements.txt
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
How to reproduce?
Install Python version 3.12 and source the environment.
When running:
pip install .within the checkout clone directory, we get the following error:
Error thrown:
When installing MobiDB-lite locally we get the following error:
ERROR: Cannot install -r requirements.txt (line 2) and numpy==2.3.2 because these package versions have conflicting dependencies.
The conflict is caused by:
The user requested numpy==2.3.2
numba 0.61.2 depends on numpy<2.3 and >=1.24
Additionally, some packages in these conflicts have no matching distributions available for your environment:
numpy
To fix this you could try to:
ERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/topics/dependency-resolution/#dealing-with-dependency-conflicts
Suggested fix
We applied a few fixes to the installation configuration, e.g. made optional dependencies mandatory, specified supported Python versions within toml file and also moved all required dependencies to the toml file.