madRich contains a set of functions for clustering gene sets fron a complex enrichment result, then visualizing clusters and annotating common function.

chooseCutHeight - offers guidance for clustering

clusterSets - generates clustering based on chosen height

clusterDendro - dendrogram of clustering solution

clusterScatter - bubble scatterplot of clustering solution

clusterTreemap - treemap of clustering solution

clusterWordclouds - gs name and description-based word clouds to aid in cluster annotation

Installation

install.packages("devtools")
devtools::install_github("BIGslu/madRich")