Hi dear developers,
I have run CLEAN_infer_fasta.py on both price.fasta and my protein seqs, and get the csv output. However, the pairwise distance present are all less than 1 looking like a probability, which is different from your interpretations and test out in the repo. If this value is a probability, may I ask at what level is it considered reliable? Thanks a lot!

Hi dear developers,
I have run CLEAN_infer_fasta.py on both price.fasta and my protein seqs, and get the csv output. However, the pairwise distance present are all less than 1 looking like a probability, which is different from your interpretations and test out in the repo. If this value is a probability, may I ask at what level is it considered reliable? Thanks a lot!