Index residues whose chain IDs are numbers

[Immortals-33]

Hello,

Thanks again for making Folddisco available. I'm using Folddisco to query a set of motifs; some of them, for instance, PDB code 3j79, has chains whose IDs are numbers. If I want to retrieve the residue 28-32 in chain 6, the query index becomes 628-32. Under this situation Folddisco querying became extremely slow, stuck in the process for > 1 hour, and I wonder it is possible that this syntax might not work at all.

One workaround on my side would be to extract the single chain with renamed chain ID to let Folddisco identify it correctly. Is it on the roadmap of Folddisco to handle this kind of queries better?

Best,
Zhuoqi

[khb7840]

1bab90c

Is this problem not solved with this commit? Could you try with latest version? If it's not solved, I'll try to fix this within the next release.

[Immortals-33]

Hi Hyunbin,

The version hitting this error is 2a756d9522d5bab8f41bc73ec72ec2327e31cd97. If I remember correctly it was downloaded as precomputed binary, so I'm not sure whether it was before or after the commit you provided.

I'll test directly upon this commit in the future and let you know if it solves the problem. Thanks for the replies!