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Commit e0aa013

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Remove hmr_posterior program
1 parent dbd2677 commit e0aa013

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Lines changed: 3 additions & 3 deletions

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src/analysis/Makefile

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -25,7 +25,7 @@ endif
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PROGS = pmd methcounts bsrate hmr hypermr \
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levels roimethstat \
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methstates methentropy hmr_posterior hmr_rep
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methstates methentropy hmr_rep
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CXX = g++
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CXXFLAGS = -Wall -fmessage-length=50 -std=c++11
@@ -41,7 +41,7 @@ CXXFLAGS += $(OPTFLAGS)
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endif
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COMMON_DIR = ../common
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INCLUDEDIRS = $(SMITHLAB_CPP) $(COMMON_DIR)
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INCLUDEDIRS = $(SMITHLAB_CPP) $(COMMON_DIR)
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INCLUDEARGS = $(addprefix -I,$(INCLUDEDIRS))
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@@ -62,7 +62,7 @@ bsrate methcounts: $(addprefix $(SMITHLAB_CPP)/, \
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bsrate methcounts: $(addprefix $(SMITHLAB_CPP)/, QualityScore.o)
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hmr pmd hmr_posterior hmr_rep: $(addprefix $(COMMON_DIR)/, TwoStateHMM.o)
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hmr pmd hmr_rep: $(addprefix $(COMMON_DIR)/, TwoStateHMM.o)
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hypermr: $(addprefix $(COMMON_DIR)/, ThreeStateHMM.o Smoothing.o \
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Distro.o BetaBin.o numerical_utils.o)

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