Repositories list

• upptime

  Public
  📈 Uptime monitor and status page for OME, powered by @upptime

  uptime-monitorstatus-pageupptime

  Markdown

  •

  MIT License

  •1•1•4•1•Updated Jan 6, 2026Jan 6, 2026

• omero-artifact-plugin

  Public
  Gradle plugin responsible for adding common build logic for publishing omero artifacts

  Kotlin

  •

  GNU General Public License v2.0

  •8•1•0•0•Updated Jan 6, 2026Jan 6, 2026

• napari-omero

  Public
  Browse your OMERO database from within napari.

  omeronapari-pluginnapari

  Python

  •

  GNU General Public License v2.0

  •16•40•15•4•Updated Jan 6, 2026Jan 6, 2026

• omero-scripts

  Public
  Core OMERO Scripts

  pythonscriptsomero

  Python

  •32•14•16•1•Updated Jan 6, 2026Jan 6, 2026

• ome-model

  Public
  OME model (specification, code generator, implementation)

  imageschemadata-model+ 3specificationcode-generationome-model

  XSLT

  •

  Other

  •28•16•9•0•Updated Jan 6, 2026Jan 6, 2026

• status

  Public
  Status dashboard for the OME project

  statusdashboardgh-pages+ 1ome

  HTML

  •5•1•4•0•Updated Jan 6, 2026Jan 6, 2026

• www.openmicroscopy.org

  Public
  OME main website

  jekyll-siteome

  HTML

  •

  Creative Commons Attribution 4.0 International

  •26•6•15•2•Updated Jan 6, 2026Jan 6, 2026

• omero-demo-cleanup

  Public
  A CLI plugin for managing the disk space on the OME demo server

  Python

  •

  GNU General Public License v2.0

  •4•2•0•0•Updated Jan 5, 2026Jan 5, 2026

• omero-figure

  Public
  An OMERO.web app for creating Figures from images in OMERO

  webappomero

  JavaScript

  •

  GNU Affero General Public License v3.0

  •37•19•63•6•Updated Jan 5, 2026Jan 5, 2026

• devspace

  Public

  ome/devspace’s past year of commit activity
  Continuous integration tool for OME projects

  dockerjenkinscontinuous-integration+ 2omerodevs

  Shell

  •17•19•21•3•Updated Jan 5, 2026Jan 5, 2026

• omero-marshal

  Public
  OMERO marshalling infrastructure

  modelmarshallingpip+ 1omero

  Python

  •

  GNU General Public License v2.0

  •11•5•3•3•Updated Jan 5, 2026Jan 5, 2026

• omero-documentation

  Public
  Sphinx-based documentation for the Open Microscopy Environment

  documentationomeroome

  Python

  •

  BSD 2-Clause "Simplified" License

  •51•23•31•9•Updated Jan 5, 2026Jan 5, 2026

• schemas

  Public
  A repository containing the published OME schemas for www.openmicroscopy.org

  XSLT

  •

  Creative Commons Attribution 4.0 International

  •4•0•1•2•Updated Jan 5, 2026Jan 5, 2026

• omero-web-apps-examples

  Public template
  Example Setup for Web Apps

  Python

  •4•1•2•7•Updated Jan 5, 2026Jan 5, 2026

• ome-zarr-py

  Public
  Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

  omezarrngff+ 1ome-zarr

  Python

  •

  Other

  •65•219•74•15•Updated Dec 22, 2025Dec 22, 2025

• openmicroscopy

  Public
  OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded …

  pythonjavaimage+ 3databaseserveromero

  Java

  •

  GNU General Public License v2.0

  •103•214•23•4•Updated Dec 22, 2025Dec 22, 2025

• omero-renderer

  Public
  Gradle project containing rendering functionality for OMERO

  componentgradlejar+ 1omero

  Java

  •

  GNU General Public License v2.0

  •10•0•2•1•Updated Dec 19, 2025Dec 19, 2025

• bio-formats-documentation

  Public
  Bio-Formats documentation

  documentationbio-formats

  Java

  •

  BSD 2-Clause "Simplified" License

  •19•9•3•0•Updated Dec 19, 2025Dec 19, 2025

• ngff-spec

  Public
  (EXPERIMENTAL) Investigation of splitting NGFF specifications out of ome/ngff

  Python

  •4•9•2•6•Updated Dec 19, 2025Dec 19, 2025

• omero-guides

  Public
  Guides for using OMERO

  docshelpomero+ 3guidesmanualsomero-training

  Python

  •

  BSD 2-Clause "Simplified" License

  •6•1•14•2•Updated Dec 19, 2025Dec 19, 2025

• omero-build

  Public
  OMERO top-level build for all components

  buildomerometa-repo

  Dockerfile

  •7•1•3•5•Updated Dec 19, 2025Dec 19, 2025

• omero-gateway-java

  Public
  Gradle project containing OMERO Java Client Library

  javaapibuild+ 5sdkcomponentgradlejaromero

  Java

  •

  GNU General Public License v2.0

  •10•1•15•2•Updated Dec 18, 2025Dec 18, 2025

• omero-blitz

  Public
  Gradle project containing Ice remoting code for OMERO

  componentserverjar+ 2libomero

  Java

  •

  GNU General Public License v2.0

  •15•0•30•2•Updated Dec 18, 2025Dec 18, 2025

• omero-server

  Public
  Gradle project containing main server logic for OMERO

  componentserverjar+ 2libomero

  Java

  •

  GNU General Public License v2.0

  •14•8•36•2•Updated Dec 18, 2025Dec 18, 2025

• omero-common

  Public
  Gradle project containing common utilities for OMERO

  libraryutilomero

  Java

  •

  GNU General Public License v2.0

  •11•1•1•2•Updated Dec 18, 2025Dec 18, 2025

• ngff

  Public
  Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

  data-sciencecloudspec+ 2bioimagingfile-formats

  Python

  •

  Other

  •59•148•114•20•Updated Dec 18, 2025Dec 18, 2025

• omero-guide-upload

  Public
  BSD 2-Clause "Simplified" License

  •4•0•0•0•Updated Dec 18, 2025Dec 18, 2025

• ansible-role-omero-searchengine

  Public
  Python

  •1•0•0•1•Updated Dec 18, 2025Dec 18, 2025

• omeroweb-install

  Public
  Jinja

  •11•2•4•1•Updated Dec 18, 2025Dec 18, 2025

• omero-guide-scripts

  Public
  BSD 2-Clause "Simplified" License

  •4•0•0•0•Updated Dec 17, 2025Dec 17, 2025