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    682 repositories

    • agora-data-tools

      Public
      A place for Agora's ETL and Data Testing
      Python
      •
      Apache License 2.0
      •3•2•0•4•Updated Jan 6, 2026Jan 6, 2026

    • genie-bpc-pipeline

      Public
      GENIE BPC pipeline scripts
      genie
      R
      •
      MIT License
      •1•4•0•4•Updated Jan 6, 2026Jan 6, 2026

    • synapsePythonClient

      Public
      Programmatic interface to Synapse services for Python
      pythonsynapse
      Python
      •
      Apache License 2.0
      •73•77•3•8•Updated Jan 5, 2026Jan 5, 2026

    • synapse-web-monorepo

      Public
      Monorepo for Synapse Web projects
      TypeScript
      •
      Apache License 2.0
      •32•9•4•34•Updated Jan 5, 2026Jan 5, 2026

    • Synapse-Repository-Services

      Public
      The Synapse Repository Services project is the home of the JSON REST web services for Synapse.
      Java
      •
      Apache License 2.0
      •54•43•0•8•Updated Jan 5, 2026Jan 5, 2026

    • sage-monorepo

      Public
      ✨ Monorepo for OpenChallenges, BioArena, Agora, and other open-source apps developed to advance open science and collaborative research.
      angularopenapimonorepofull-stackfairdeveloper-experiencenxagoradev-exspecification-first
      TypeScript
      •
      Apache License 2.0
      •15•26•125•7•Updated Jan 5, 2026Jan 5, 2026

    • synapse-ops-core

      Public
      Synapse Ops scripts workflows and CDK+workflow for creating self-hosted runners
      Shell
      •
      Apache License 2.0
      •4•0•0•3•Updated Jan 5, 2026Jan 5, 2026

    • data_curator_config

      Public
      Project configurations for the Data Curator App
      23•2•0•0•Updated Jan 5, 2026Jan 5, 2026

    • SynapseWebClient

      Public
      The web client of the Synapse REST service core
      JavaScript
      •
      Apache License 2.0
      •40•24•1•9•Updated Jan 5, 2026Jan 5, 2026

    • Synapse-Stack-Builder

      Public
      Project for building a complete Synapse Stack
      Java
      •
      Apache License 2.0
      •24•6•0•11•Updated Jan 3, 2026Jan 3, 2026

    • genie-rw-response

      Public
      Evaluation of some potential real world response algorithms in GENIE BPC
      HTML
      •0•0•0•0•Updated Jan 3, 2026Jan 3, 2026

    • model-ad-data-manager

      Public
      Shell
      •
      Apache License 2.0
      •3•0•0•1•Updated Dec 30, 2025Dec 30, 2025

    • agora-data-manager

      Public
      Tool to manage agora data
      Shell
      •
      Apache License 2.0
      •10•0•0•0•Updated Dec 30, 2025Dec 30, 2025

    • snowflake

      Public
      Snowflake Administration, Transformations, and Analytics
      snowflake
      Python
      •
      Apache License 2.0
      •4•5•0•4•Updated Dec 30, 2025Dec 30, 2025

    • iatlas-cbioportal-export

      Public
      ETL pipeline for processing and exporting iAtlas files to be cBioportal ingestion ready
      Python
      •0•1•0•0•Updated Dec 29, 2025Dec 29, 2025

    • Genie

      Public
      Validation and processing of GENIE files
      pythonetlgeniedpecomponc
      Python
      •
      MIT License
      •9•15•2•2•Updated Dec 20, 2025Dec 20, 2025

    • CI-Build-Tools

      Public
      Collection of Gists
      Shell
      •5•0•0•2•Updated Dec 19, 2025Dec 19, 2025

    • Synapse-Migration-Utility

      Public
      Utility to migrate one Synapse stack to another
      Java
      •
      Apache License 2.0
      •5•0•0•1•Updated Dec 19, 2025Dec 19, 2025

    • Bridge-Exporter

      Public
      Worker app to aggregate Bridge uploads, survey answers, and health data daily, and export them to Synapse
      Java
      •
      Other
      •9•0•0•1•Updated Dec 19, 2025Dec 19, 2025

    • BridgeWorkerPlatform

      Public
      General platform holding all services in Bridge
      Java
      •
      Other
      •14•1•0•4•Updated Dec 19, 2025Dec 19, 2025

    • synapse-mcp

      Public
      Python
      •
      MIT License
      •0•2•0•1•Updated Dec 19, 2025Dec 19, 2025

    • CLASSIC

      Public
      For maintaining the CLASSIC data model and metadata templates.
      MIT License
      •0•2•0•0•Updated Dec 17, 2025Dec 17, 2025

    • shiny-base

      Public
      Base Docker image for Shiny applications
      Dockerfile
      •1•0•0•0•Updated Dec 13, 2025Dec 13, 2025

    • stop-ad-v2

      Public
      TypeScript
      •0•0•0•0•Updated Dec 8, 2025Dec 8, 2025

    • Synapse-Stack-Review-Agenda

      Public
      This is the agenda for the weekly Synapse stack release meeting
      HTML
      •6•0•0•1•Updated Dec 6, 2025Dec 6, 2025

    • JustTheDocsDataDictionary

      Public
      An R package for generating content for JustTheDocs themed Schematic data model dictionary site on GitHub pages
      R
      •
      Other
      •0•2•0•0•Updated Dec 5, 2025Dec 5, 2025

    • genie-data-model-planning

      Public
      R
      •0•0•0•0•Updated Dec 5, 2025Dec 5, 2025

    • synapse-login-aws-infra

      Public
      scipoolsage-bionetworks-it
      Apache License 2.0
      •5•0•0•0•Updated Dec 3, 2025Dec 3, 2025

    • Synapse-Code-Pipeline

      Public
      GitHub workflow to execute a Synapse job using Code Pipeline
      Apache License 2.0
      •1•0•0•0•Updated Dec 2, 2025Dec 2, 2025

    • scicomp-provisioner

      Public
      An service to auto provision resources
      Jinja
      •
      Apache License 2.0
      •45•1•0•0•Updated Dec 1, 2025Dec 1, 2025