README.md

Tutorials and HowTO Guides

At icipe, we host a serveral tools, pipelines and Platforms for Genomic data analysis. We will make use of this repo to provide anguide on how to run graphical software's, Pipelines and tutorials on sample use cases of analysis on the HPC.

Here is what we have:

1. Installing Software using Bi-conda
2. Data-management-best-practices
   • R-Server
   • Docker
3. Running CCBGpipe
4. Running Cytoscape
5. Running DADA2 Pipeline
6. Slurm user Guide
7. Running Genesis