spectHR/workspace.json at main · markspan/spectHR · GitHub

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{
    "Directories": {
        "DataDirectory": "C:/Users/mmspa/Documents/GitHub/spectHR/ExampleData/data",
        "CacheDirectory": "C:\\Users\\mmspa\\AppData\\Local\\spectHR\\spectHR\\Cache",
        "OutputDirectory": "C:\\Users\\mmspa\\Documents\\spectHR\\export"
    },
    "FrequencyAnalysis": {
        "method": "carspan_strict",
        "bands": {
            "FullRange": {
                "low": 0.02,
                "high": 0.5,
                "color": "gray",
                "alpha": 0.35
            },
            "VLF": {
                "low": 0.02,
                "high": 0.06,
                "color": "blue",
                "alpha": 0.2
            },
            "LF": {
                "low": 0.07,
                "high": 0.14,
                "color": "darkgreen",
                "alpha": 0.2
            },
            "HF": {
                "low": 0.15,
                "high": 0.4,
                "color": "red",
                "alpha": 0.2
            }
        },
        "carspan": {
            "freq_resolution": 0.01,
            "signal": "events",
            "window": "10% cosine bell",
            "plot_units": "mMI²/Hz",
            "smooth_for_display": true,
            "dc_removal": true
        },
        "welch": {
            "fs": 2.0,
            "nperseg": 256,
            "noverlap": 128,
            "nfft": 512,
            "window": "hann",
            "units": "mMI²"
        },
        "lombscargle": {
            "nfreqs": 100,
            "fmin_floor": 0.0001,
            "units": "mMI²"
        },
        "confidence_interval_alpha": 0.05
    },
    "CardioParameters": {
        "IbiClassification": {
            "window_length": 20,
            "n_std": 3.0,
            "max_ibi_sec": 2.5,
            "min_peak_distance_ms": 300.0
        },
        "EcgPreprocessing": {
            "filter_type": "highpass",
            "filter_cutoff": 0.5,
            "display_filtered": false
        }
    },
    "Calibration": {
        "bp_scale": 0.125,
        "bp_zero": 0.0
    },
    "IcgAnalysis": {
        "b_point_guard_ms": 30.0
    },
    "Profiles": {
        "window (sec)": 60.0,
        "step (sec)": 2.5,
        "bands": [],
        "adaptive_bands": {
            "LF": {
                "lower half-width (Hz)": 0.04,
                "upper half-width (Hz)": 0.04
            }
        },
        "adaptive_source": "psd_peak",
        "smooth_breath_freq": false,
        "smooth_for_display": false
    },
    "Spectrogram": {
        "window (sec)": 60.0,
        "step (sec)": 2.5,
        "show_respiration_overlay": true,
        "colormap": "RdYlBu_r"
    },
    "TransferAnalysis": {
        "input_signal": "bp_sys",
        "window (sec)": 60.0,
        "step (sec)": 2.5,
        "min_coherence": 0.5,
        "f_min": 0.0,
        "f_max": 0.5,
        "smooth": true,
        "phase_view": "unwrapped",
        "show_coherence_threshold": true,
        "coherence_mask_alpha": 0.2
    },
    "RespirationAnalysis": {
        "per_epoch": false,
        "rsa_lag_s": 1.0,
        "rsa_overlay": "rsa0",
        "rsp_source": "icg",
        "rsa_rejection_mode": "strict"
    },
    "Logging": {
        "level": "INFO"
    }
}