feat: fix bugs and warnings #139

	name: Code quality checks

	on:
	push:
	pull_request:

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	jobs:
	ci:
	name: Lint & Test
	runs-on: ubuntu-24.04
	steps:
	- uses: actions/checkout@v5
	with:
	lfs: true

	- name: Setup environment
	uses: ./.github/actions/setup

	# TODO: add ruff check
	# - name: Ruff check
	# run: uv run --dev ruff check cell2mol --output-format=github

	- name: Ruff format
	run: uv run --dev ruff format --check

	- name: Pre-commit hooks
	if: ${{ !cancelled() }}
	run: SKIP=ruff-format uv run --dev pre-commit run --all-files

	- name: Run unit tests
	if: ${{ !cancelled() }}
	run: uv run --group test pytest

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