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statically link against conda htslib instead of bundled htslib #18

statically link against conda htslib instead of bundled htslib

statically link against conda htslib instead of bundled htslib #18

Triggered via pull request March 17, 2026 18:18
@aryarmaryarm
opened #4
htslib
Status Failure
Total duration 25m 23s
Artifacts 2

bioconda.yml

on: pull_request
Matrix: build
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2 errors and 3 warnings
Build on ubuntu-24.04-arm
Process completed with exit code 1.
Build on ubuntu-latest
Process completed with exit code 1.
Build on ubuntu-latest
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Build on macos-latest
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Build on macos-15-intel
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: conda-incubator/setup-miniconda@v3. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Artifacts

Produced during runtime
Name Size Digest
HipSTR-macos-15-intel
1010 KB
sha256:23e3e03225d4fe25ddc83bba28c932ff2303dfa7782716a4a9f83c5d580cd420
HipSTR-macos-latest
972 KB
sha256:cee012501fa9cbcbcf7f550ed69963db6fd4e99972c661a8df43df1c5a14d9ac