human

import anatomogram
import matplotlib.pyplot as plt
fig,ax=plt.subplots(figsize=(6,10))
anatomogram2 = pyanatomogram.Anatomogram('homo_sapiens.female')
anatomogram2.highlight_tissues({'heart': 0, 'lung': 2, 'brain': 3, 'colon': 1, 'liver': 4, 'breast':5, 
                                'stomach':6,'esophagus':7, 'ovary':8, 'uterus':9, 'pancreas':10, 
                                'lymph node':11,'gall bladder':12, 'skin':13, 'thyroid gland':14,'kidney':15,
                               'uterine cervix':16, 'bronchus':17}, cmap='twilight_shifted')
anatomogram2.to_matplotlib(ax=ax)


annotations = {
    'lung': ((0, 0), (48, 44)),
    'heart': ((0, 10), (52, 48)),
    'brain': ((25, 0), (50, 5)),
    'colon': ((0,95), (43, 85)),
    'liver': ((0, 53), (43, 65)),
    'breast': ((100, 30), (62, 50)),
    'stomach': ((100, 62), (51, 70)),
    'esophagus': ((80, 20), (51, 40)),
    'ovary': ((95, 78), (50.5, 88.5)),
    'uterus': ((90, 88), (58, 90.75)),
    'pancreas': ((93, 50), (62, 64)),
    'lymph node': ((75, 0), (56, 27)),
    'gall bladder':((0,62),(49,70)),
    'skin':((10,120),(45,125)),
    'thyroid gland':((22,10),(52,31)),
    'kidney':((0,85),(45,72))
}

# Add annotations with arrows and text boxes
for organ, ((x_text, y_text), (x_arrow, y_arrow)) in annotations.items():
    ax.annotate(
        organ.capitalize(),
        xy=(x_arrow, y_arrow)
        xytext=(x_text, y_text)
        arrowprops=dict(facecolor='black', arrowstyle='->'),
        bbox=dict(boxstyle='round,pad=0.3', fc='white', ec='black', lw=1),
        fontsize=8
    )
plt.show()
fig.savefig('highlighted_woman.svg')