Caster sliding window

[austinchipps]

I wanted to first thank you for your work in developing CASTER!

I'm currently working through CASTER windowed D-statistic analysis, and when I use my data I'm getting an output that looks different from the provided example (slidingwindow.tsv). First, the column titles are different when I run the analysis with my data. Are they representative of the same thing? I also notice that my c*AABB field has much higher numbers compared to the example. I'm not sure if this suggests a problem with my input data? For your convenience, I've attached my resulting .tsv file as well as my mapping .tsv file.

Thank you for your time!

Austin

mapping1.txt
window_test1.txt

[chaoszhang]

c*AABB >> c*ABBA+ c*BABA indicates that there is no significant signal of ILS nor introgression. Is group C too distant from the common ancestor of A and B?