process_folder.sh

#!/usr/bin/bash
#set -x

if [ "$#" -lt 5 ]
  then
    echo "analyseResults.sh <path_preprocessor> <path_input_afs> <path_output_afs> <ext_af> <ext_query> <ext_simpl>"
    echo "<path_preprocessor>       Path to the executable of af_preprocessor used to simplify the frameworks\n"
    echo "<path_input_afs>          Path to the folder containing the frameworks in .i23/.tgf format to simplify.\n"
    echo "<path_output_afs>         Path to the folder in which the simplified frameworks are to be saved to as .i23 files.\n"
    echo "<ext_af>                  File extension of the files that contain the argumentation framework.\n"
    echo "<ext_query>               File extension of the files that contain the query argument (e.g. '.af.arg').\n"
    echo "<ext_simpl>               File extension of the new created simplified files. If empty files are same than original input\n"
    exit 1    
fi

path_preprocessor=$1
dir_input_afs=$2
dir_output_afs=$3
ext_af=$4
ext_query=$5
ext_simpl=$6
    
# Check if irectory
if [ ! -d "$dir_input_afs" ]; then
    echo "$dir_input_afs"
    echo "Path does not lead to a directory"
    exit 1
fi

# Check if irectory
if [ ! -d "$dir_output_afs" ]; then
    echo "$dir_output_afs"
    echo "Path does not lead to a directory"
    exit 1
fi

# count files
num_files=0
for file_input_af in "$dir_input_afs"/*"$ext_af"; do
    ((num_files++))
done

# iterate through files of the input
num_processed=0
for file_input_af in "$dir_input_afs"/*"$ext_af"; do
    file_basename_af="$(basename -- $file_input_af "$ext_af")"

    # Determine the corresponding args-file
    file_args="$dir_input_afs"/"$file_basename_af""$ext_query"

    # Check if the args-file exists
    if [ ! -f "$file_args" ]; then
        echo "Warning: $file_args does not exist. Skipping."
        continue
    fi

    # Read the first line of the args-file to get the query argument
    query_input=$(head -n 1 "$file_args")

    file_output_af="$dir_output_afs"/"$file_basename_af""$ext_simpl".i23
    file_output_args=$dir_output_afs"/"$file_basename_af""$ext_simpl"_args.txt"

    # create file to indicate new query argument
    file_output_query="$dir_output_afs"/"$file_basename_af""$ext_simpl""$ext_query"
            > $file_output_query cat <<< "1"
    
    ./build/AFPreprocessor -f "$file_input_af" -a $query_input -r "$file_output_af" -e "$file_output_args" --quiet
    ((num_processed++))
    echo "Processed ($num_processed/$num_files)"
done