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NAMESPACE
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71 lines (70 loc) · 2.02 KB
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# Generated by roxygen2: do not edit by hand
export(MSstatsPrepareDoseResponseFit)
export(calculatePeptideWeights)
export(calculateTurnoverRatios)
export(convertGroupToNumericDose)
export(doseResponseFit)
export(futureExperimentSimulation)
export(plot_tpr_power_curve)
export(predictIC50)
export(predictIC50Parallel)
export(run_tpr_simulation)
export(visualizeResponseProtein)
import(dplyr)
importFrom(BiocParallel,bplapply)
importFrom(BiocParallel,bpparam)
importFrom(data.table,rbindlist)
importFrom(dplyr,across)
importFrom(dplyr,all_of)
importFrom(dplyr,arrange)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,if_else)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(dplyr,rename)
importFrom(dplyr,select)
importFrom(dplyr,slice_head)
importFrom(dplyr,summarise)
importFrom(dplyr,ungroup)
importFrom(ggplot2,aes)
importFrom(ggplot2,annotate)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,theme_classic)
importFrom(ggplot2,theme_minimal)
importFrom(ggplot2,ylim)
importFrom(parallel,clusterExport)
importFrom(parallel,makeCluster)
importFrom(parallel,parLapply)
importFrom(parallel,stopCluster)
importFrom(plotly,ggplotly)
importFrom(plotly,layout)
importFrom(stats,approx)
importFrom(stats,cor)
importFrom(stats,p.adjust)
importFrom(stats,pf)
importFrom(stats,quantile)
importFrom(stats,rlnorm)
importFrom(stats,rnorm)
importFrom(stringr,str_detect)
importFrom(stringr,str_extract)
importFrom(stringr,str_remove_all)
importFrom(tidyr,pivot_wider)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)