pyproject.toml

[build-system]
requires = ["setuptools>=64", "wheel", "setuptools-scm[toml]>=7"]
build-backend = "setuptools.build_meta"

[project]
name = "emcaps"
description = "Code for the paper Genetically encoded barcodes for correlative volume electron microscopy"
readme = "README.md"
requires-python = ">=3.10"
keywords = ["emcapsulin", "encapsulin"]
license = {file = "LICENSE"}
classifiers = [
    "Programming Language :: Python :: 3",
    "License :: OSI Approved :: MIT License",
    "Topic :: Scientific/Engineering :: Image Processing",
    "Topic :: Scientific/Engineering :: Image Recognition",
]
dynamic = ["version", "dependencies"]

[project.scripts]
emcaps-splitdataset = "emcaps.utils.splitdataset:main"
emcaps-segtrain = "emcaps.training.segtrain:main"
emcaps-segment = "emcaps.inference.segment:main"
emcaps-patchifyseg = "emcaps.inference.patchifyseg:main"
emcaps-patcheval = "emcaps.inference.patcheval:main"
emcaps-encari = "emcaps.analysis.encari:main"
emcaps-averagepatches = "emcaps.analysis.averagepatches:main"

[tool.setuptools]
packages = ["emcaps"]

[tool.setuptools.dynamic]
dependencies = {file = ["requirements.txt"]}

[tool.setuptools_scm]
write_to = "emcaps/_version.py"