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tests fixing #168

	name: HTTomo tests

	on:
	workflow_dispatch:
	pull_request:
	branches:
	- main
	push:
	branches:
	- main

	jobs:
	tests-linux:
	runs-on: ubuntu-latest
	defaults:
	run:
	shell: bash -l {0}
	steps:
	- name: Checkout repository code
	uses: actions/checkout@v5

	- name: Create conda environment
	uses: mamba-org/setup-micromamba@v2
	with:
	environment-name: httomo
	create-args: >-
	python==3.12
	numpy==2.4
	h5py==mpi_openmpi*
	mpi4py
	tomopy==1.15.3
	post-cleanup: 'all'
	init-shell: bash

	- name: Install httomo libraries and httomo
	run: \|
	micromamba activate httomo
	python -m pip install --no-deps pytest pytest-cov
	python -m pip install --no-deps tomobar
	python -m pip install --no-deps httomolibgpu
	python -m pip install --no-deps httomolib
	python -m pip install --no-deps httomo-backends
	pip install . --no-deps
	micromamba list

	- name: Generate full yaml pipelines using pipeline directives
	run: \|
	python -m pip install pyyaml pluggy Pygments iniconfig loguru tqdm graypy hdf5plugin pytest_mock plumbum click
	python -m pip install aiofiles pillow
	python -m pip install "ruamel.yaml>0.18.0"
	python ./docs/source/scripts/execute_pipelines_build.py -o ./docs/source/pipelines_full/

	- name: Run HTTomo framework tests
	run: \|
	pytest tests/