Not possible to run pipeline with untarred VCF file

[beatrizsavinhas]

Description

When running the pipeline with an untarred vcf file (in this case sv_vcf) the following error is thrown:

The following invalid input values have been detected:

* --sv_vcf (<file>.vcf): "<file>.vcf" does not match regular expression [^\S+\.vcf\.gz$]

How to reproduce

1. Run nextflow run . -profile docker,test --outdir results -resume --sv_vcf <file>.vcf, given that the file is untarred.
2. See error.

Expected behaviour

The pipeline should run with an untarred file.

Anything else?

No response

System information

No response