Errors with Jellyfish files

[krcurtis]

Hi, I'm trying to run DiffKAP on the sample data, and I'm getting back some error messages (below) which make me wonder if DiffKap was written to work with a particular version of Jellyfish. I'm currently using version 2.3.0.

Any suggestions?

Here's the initial part of the error message:

INFO - ##### Reading configuration file: sampleProj.cfg
INFO - ##### Identifying Kmer Size
INFO - ##### Reading configuration file: sampleProj.cfg
INFO - *** Start 2892: kmer counting for 5mer ***
INFO - *** Start 2894: kmer counting for 6mer ***
INFO - *** Start 2895: kmer counting for 7mer ***
INFO - *** Start 2897: kmer counting for 8mer ***
INFO - *** Start 2899: kmer counting for 9mer ***
mv: missing destination file operand after '/fh/fast/lampe_j/Gut_Bugs/keith-working/t1044-work/sample-result/CON-STE/identifyKmerSize/CON-STE_6mer_merged.jf'
Try 'mv --help' for more information.
ERROR - Error in renaming /fh/fast/lampe_j/Gut_Bugs/keith-working/t1044-work/sampleProj/data_Control/C_1_sub.fasta /fh/fast/lampe_j/Gut_Bugs/keith-working/t1044-work/sampleProj/data_Treatment/T_1_sub.fasta  to /fh/fast/lampe_j/Gut_Bugs/keith-working/t1044-work/sample-result/CON-STE/identifyKmerSize/CON-STE_6mer_merged.jf

Thanks