download_ebi() function: Warnings in mutate()

[silargi]

Reporting, as requested (see below).

When running:
efe_van_ebi_ast_ftp <- download_ebi(
species = "Enterococcus faecium",
antibiotic = "vancomycin",
release = "2025-12",
reformat = TRUE,
interpret_clsi = TRUE,
interpret_ecoff = TRUE
)

Warning: There were 2 warnings in mutate().
The first warning was:
ℹ In argument: across(...).
Caused by warning:
! The ... argument of across() is deprecated as of dplyr 1.1.0.
Supply arguments directly to .fns through an anonymous function instead.

Previously

across(a:b, mean, na.rm = TRUE)

Now

across(a:b, (x) mean(x, na.rm = TRUE))
ℹ The deprecated feature was likely used in the AMRgen package.
Please report the issue at https://github.com/AMRverse/AMRgen/issues.
This warning is displayed once per session.
Call lifecycle::last_lifecycle_warnings() to see where this warning was generated.
ℹ Run dplyr::last_dplyr_warnings() to see the 1 remaining warning.

[katholt]

This is in the call to interpret_ast, I have fixed it there.
Would be great if you could test to confirm, as I was not getting this message so can't tell if it's resolved.

[katholt]

@silargi just checking this is now fixed?